RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 AAGABQ6PD74 315 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 IRF2BP2Q7Z5L9 587 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 IGFN1Q86VF2 1251 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 LRRTM4Q86VH4 590 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 SLC25A41Q8N5S1 370 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 CCDC89Q8N998 374 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 SCAIQ8N9R8 606 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 USP38Q8NB14 1042 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 CMASQ8NFW8 434 aaPredicted RBP3.73□□□□□ -1.81
VMP1-212ENST00000591782 SCARB1Q8WTV0 552 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 CENPIQ92674 756 aaPredicted RBP3.73□□□□□ -1.81
VMP1-212ENST00000591782 STAMQ92783 540 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 SLC25A28Q96A46 364 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 CCDC34Q96HJ3 373 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 NEUROD6Q96NK8 337 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 FRG2BQ96QU4 278 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 REEP2Q9BRK0 252 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 IFT27Q9BW83 186 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 TEX13AQ9BXU3 409 aaPredicted RBP3.73□□□□□ -1.81
VMP1-212ENST00000591782 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.73□□□□□ -1.81
VMP1-212ENST00000591782 STN1Q9H668 368 aaKnown RBP3.73□□□□□ -1.81
VMP1-212ENST00000591782 ACTR5Q9H9F9 607 aaPredicted RBP3.73□□□□□ -1.81
VMP1-212ENST00000591782 MAP6D1Q9H9H5 199 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 DECR2Q9NUI1 292 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 ZNHIT6Q9NWK9 470 aaKnown RBP3.73□□□□□ -1.81
VMP1-212ENST00000591782 HDAC6Q9UBN7 1215 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 NRBP1Q9UHY1 535 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 CD207Q9UJ71 328 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 ICKQ9UPZ9 632 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 GDAQ9Y2T3 454 aa3.73□□□□□ -1.81
VMP1-212ENST00000591782 SMARCA2P51531 1590 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 IGLV5-39A0A0G2JS06 123 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 TMEM247A6NEH6 219 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 PEX12O00623 359 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 ZC3H11AO75152 810 aaKnown RBP eCLIP3.72□□□□□ -1.81
VMP1-212ENST00000591782 TPPPO94811 219 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 DDAH2O95865 285 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 WEE2P0C1S8 567 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 PSG1P11464 419 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 CD72P21854 359 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 LMO1P25800 156 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 HNF1BP35680 557 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 SLC16A2P36021 539 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 GJC1P36383 396 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 PTPN9P43378 593 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 MAPK9P45984 424 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 MTNR1AP48039 350 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 TRPC1P48995 793 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 CCR5P51681 352 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 UBE3AQ05086 875 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 POU5F1BQ06416 359 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 GABPB1Q06547 395 aaPredicted RBP3.72□□□□□ -1.81
VMP1-212ENST00000591782 GOLGA8FQ08AF8 430 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 LAMB3Q13751 1172 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 ODF3L2Q3SX64 289 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 AP1ARQ63HQ0 302 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 NAPEPLDQ6IQ20 393 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 AADACL2Q6P093 401 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 C16orf87Q6PH81 154 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 COLCA1Q6ZS62 124 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 ZNF771Q7L3S4 317 aaPredicted RBP3.72□□□□□ -1.81
VMP1-212ENST00000591782 LRRC57Q8N9N7 239 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 FAM184AQ8NB25 1140 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 TBC1D22AQ8WUA7 517 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 TMEM174Q8WUU8 243 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 FAR1Q8WVX9 515 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 PPM1EQ8WY54 764 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 NCSTNQ92542 709 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 HMCESQ96FZ2 354 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 NLRP4Q96MN2 994 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 FCRL4Q96PJ5 515 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 LZTS2Q9BRK4 669 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 UPF2Q9HAU5 1272 aaKnown RBP3.72□□□□□ -1.81
VMP1-212ENST00000591782 PNRC2Q9NPJ4 139 aaKnown RBP3.72□□□□□ -1.81
VMP1-212ENST00000591782 POT1Q9NUX5 634 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 ZDHHC7Q9NXF8 308 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 GGA3Q9NZ52 723 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 STK26Q9P289 416 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 ERCC6L2Q5T890 1561 aa3.72□□□□□ -1.81
VMP1-212ENST00000591782 CKAP5Q14008 2032 aa3.71□□□□□ -1.81
VMP1-212ENST00000591782 TARSL2A2RTX5 802 aaKnown RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 RRN3P2A6NIE6 340 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 MDM4O15151 490 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 STRNO43815 780 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 HBP1O60381 514 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 TSPAN3O60637 253 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 TULP3O75386 442 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 E2F6O75461 281 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 CBX6O95503 412 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 POLBP06746 335 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 PRKCHP24723 683 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 SKIV2L2P42285 1042 aaKnown RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 EIF5P55010 431 aaKnown RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 CHRNDQ07001 517 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 PRPF4BQ13523 1007 aaKnown RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 KCTD2Q14681 263 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 SLMAPQ14BN4 828 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 MAPRE1Q15691 268 aaKnown RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 CCDC152Q4G0S7 254 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 C1QTNF12Q5T7M4 302 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms