RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 DYRK4Q9NR20 520 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 PAXBP1Q9Y5B6 917 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 A0A1B0GTH6 734 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 THAP12O43422 761 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 PLRG1O43660 514 aaKnown RBP9.68□□□□□ -0.86
BRCA1-226ENST00000591534 HSF2BPO75031 334 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 CLDN11O75508 207 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 SERPINC1P01008 464 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 WNT1P04628 370 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 FYNP06241 537 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 ALPPL2P10696 532 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 PDGFRAP16234 1089 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 GNA15P30679 374 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 ACADVLP49748 655 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 SEMG2Q02383 582 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 KCNJ12Q14500 433 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 RTP5Q14D33 572 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 HES3Q5TGS1 186 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 SYPL2Q5VXT5 272 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 NEK5Q6P3R8 708 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 TRIM69Q86WT6 500 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 APCDD1Q8J025 514 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 CCAR2Q8N163 923 aaKnown RBP9.68□□□□□ -0.86
BRCA1-226ENST00000591534 LMO3Q8TAP4 145 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 FGF11Q92914 225 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 TRIM44Q96DX7 344 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-226ENST00000591534 KLHDC7BQ96G42 594 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 RPRD1AQ96P16 312 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-226ENST00000591534 ZSWIM1Q9BR11 485 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 TRIM5Q9C035 493 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 UBE2TQ9NPD8 197 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-226ENST00000591534 ASNSD1Q9NWL6 643 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 DDIT4Q9NX09 232 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 RRN3Q9NYV6 651 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 CYTH4Q9UIA0 394 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 VPS28Q9UK41 221 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 CNTN6Q9UQ52 1028 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 CLCA2Q9UQC9 943 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 DAAM1Q9Y4D1 1078 aa9.68□□□□□ -0.86
BRCA1-226ENST00000591534 ADAMTS20P59510 1910 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 NEMP2A6NFY4 417 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 E5RJQ4 531 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 MCF2LO15068 1137 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 GLDCP23378 1020 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 ACP1P24666 158 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 CDC25BP30305 580 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 EIF2S3P41091 472 aaKnown RBP9.67□□□□□ -0.86
BRCA1-226ENST00000591534 RECQLP46063 649 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-226ENST00000591534 STK19P49842 368 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-226ENST00000591534 DAB2P98082 770 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 APBA1Q02410 837 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 DNAJC3Q13217 504 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 PDCLQ13371 301 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 TRIM14Q14142 442 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 IQCB1Q15051 598 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 SHBQ15464 509 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 DLG2Q15700 870 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 SFMBT2Q5VUG0 894 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 ZNF787Q6DD87 383 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 DENND1BQ6P3S1 775 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 FBXL19Q6PCT2 694 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 MARCH9Q86YJ5 346 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 ARHGEF19Q8IW93 802 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 LSMEM2Q8N112 164 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 AOPEPQ8N6M6 819 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 RNF214Q8ND24 703 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 PIP4K2CQ8TBX8 421 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 ZNF606Q8WXB4 792 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 RFFLQ8WZ73 363 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 FAM131CQ96AQ9 280 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 MRRFQ96E11 262 aaKnown RBP9.67□□□□□ -0.86
BRCA1-226ENST00000591534 MRFAP1L1Q96HT8 127 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 PPP1R16AQ96I34 528 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 CITED4Q96RK1 184 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 FEM1AQ9BSK4 669 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 SRRTQ9BXP5 876 aaKnown RBP9.67□□□□□ -0.86
BRCA1-226ENST00000591534 INTS2Q9H0H0 1204 aaKnown RBP9.67□□□□□ -0.86
BRCA1-226ENST00000591534 MUC3BQ9H195 1237 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 SYNCQ9H7C4 482 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 EBF2Q9HAK2 575 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 IMPACTQ9P2X3 320 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 PPM1HQ9ULR3 514 aa9.67□□□□□ -0.86
BRCA1-226ENST00000591534 SYNJ2BP-COX16A0A087WUM0 186 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 MAN1A2O60476 641 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 RTN2O75298 545 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 IGLV3-25P01717 112 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 PRNPP04156 253 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 MAT2AP31153 395 aaKnown RBP9.66□□□□□ -0.86
BRCA1-226ENST00000591534 AKT2P31751 481 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 DRD3P35462 400 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 USP8P40818 1118 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 DUSP3P51452 185 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-226ENST00000591534 UCNP55089 124 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 CDH4P55283 916 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 GSDMDP57764 484 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 CNTN1Q12860 1018 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 BNIP3Q12983 259 aa9.66□□□□□ -0.86
BRCA1-226ENST00000591534 AUHQ13825 339 aaKnown RBP9.66□□□□□ -0.86
BRCA1-226ENST00000591534 FKBP15Q5T1M5 1219 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms