RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SERGEFQ9UGK8 458 aa12.11□□□□□ -0.47
LIG3-213ENST00000590630 PILRBQ9UKJ0 227 aa12.11□□□□□ -0.47
LIG3-213ENST00000590630 SARDHQ9UL12 918 aa12.11□□□□□ -0.47
LIG3-213ENST00000590630 REXO2Q9Y3B8 237 aaKnown RBP12.11□□□□□ -0.47
LIG3-213ENST00000590630 ACTL7AQ9Y615 435 aa12.11□□□□□ -0.47
LIG3-213ENST00000590630 LRRC72A6NJI9 287 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 METTL12A8MUP2 240 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 MEI4A8MW99 385 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 ZNF487B1APH4 448 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 DFFAO00273 331 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 BUB1BO60566 1050 aaPredicted RBP12.1□□□□□ -0.47
LIG3-213ENST00000590630 CTSLP07711 333 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 COMTP21964 271 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 ITPKAP23677 461 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 VAV2P52735 878 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 LMNB2Q03252 620 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 IL10RBQ08334 325 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 RFTN1Q14699 578 aaPredicted RBP12.1□□□□□ -0.47
LIG3-213ENST00000590630 ANKRD20A8PQ5CZ79 823 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 C11orf63Q6NUN7 778 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 LEKR1Q6ZMV7 388 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 PRR23CQ6ZRP0 262 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 LRRC49Q8IUZ0 686 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 RHOT1Q8IXI2 618 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 KIAA2013Q8IYS2 634 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 DEFB119Q8N690 84 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 GRIN3AQ8TCU5 1115 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 DNASE2BQ8WZ79 361 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 PIGKQ92643 395 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 FAF2Q96CS3 445 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 GDAP1L1Q96MZ0 367 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 HEPHQ9BQS7 1158 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 SP110Q9HB58 689 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 DYRK4Q9NR20 520 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 KLHL11Q9NVR0 708 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 HECAQ9UBI9 543 aaPredicted RBP12.1□□□□□ -0.47
LIG3-213ENST00000590630 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
LIG3-213ENST00000590630 TFR2Q9UP52 801 aa12.1□□□□□ -0.47
LIG3-213ENST00000590630 DOCK9Q9BZ29 2069 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 LRRD1A4D1F6 860 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 J3KR12 359 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 KPNA3O00505 521 aaPredicted RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 PJA2O43164 708 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 PSTPIP1O43586 416 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 LEFTY1O75610 366 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 PALMO75781 387 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 POP4O95707 220 aaKnown RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 IGSF6O95976 241 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 KDELR1P24390 212 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 ITGB7P26010 798 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 METAP1P53582 386 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 ADPRHP54922 357 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 RHOAP61586 193 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 RAD51Q06609 339 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 CNTN1Q12860 1018 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 CCDC6Q16204 474 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 ODF2Q5BJF6 829 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 DCAF12L1Q5VU92 463 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 KIAA1328Q86T90 577 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 RGL4Q8IZJ4 473 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 RYBPQ8N488 228 aaPredicted RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 ATPAF2Q8N5M1 289 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 C12orf50Q8NA57 414 aaPredicted RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 ACRBPQ8NEB7 543 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 CCDC112Q8NEF3 446 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 OR2T34Q8NGX1 318 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 OR14C36Q8NHC7 312 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 PCDH19Q8TAB3 1148 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 CEP76Q8TAP6 659 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 RAPGEF5Q92565 580 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 ZNF599Q96NL3 588 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 OSBPL1AQ9BXW6 950 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 HDAC8Q9BY41 377 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 C6orf106Q9H6K1 298 aaPredicted RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 ZDHHC6Q9H6R6 413 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 GRPEL1Q9HAV7 217 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 TMEM74BQ9NUR3 256 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 DDX56Q9NY93 547 aaKnown RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 SUSD2Q9UGT4 822 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 EVLQ9UI08 416 aaPredicted RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 IPO11Q9UI26 975 aaKnown RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.09□□□□□ -0.47
LIG3-213ENST00000590630 MFHAS1Q9Y4C4 1052 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 ALG6Q9Y672 507 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 WASF2Q9Y6W5 498 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 TRPM6Q9BX84 2022 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
LIG3-213ENST00000590630 PLXNA2O75051 1894 aa12.08□□□□□ -0.48
LIG3-213ENST00000590630 ADAMTS9Q9P2N4 1935 aa12.08□□□□□ -0.48
LIG3-213ENST00000590630 DNAH14Q0VDD8 3507 aa12.08□□□□□ -0.48
LIG3-213ENST00000590630 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
LIG3-213ENST00000590630 C3orf70A6NLC5 250 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms