RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 DDX56Q9NY93 547 aaKnown RBP21.93■■□□□ 1.1
R3HDM4-206ENST00000590454 RCOR3Q9P2K3 495 aaPredicted RBP21.93■■□□□ 1.1
R3HDM4-206ENST00000590454 MBD1Q9UIS9 605 aaPredicted RBP21.93■■□□□ 1.1
R3HDM4-206ENST00000590454 PILRBQ9UKJ0 227 aa21.93■■□□□ 1.1
R3HDM4-206ENST00000590454 PCDHA3Q9Y5H8 950 aa21.93■■□□□ 1.1
R3HDM4-206ENST00000590454 RAD54BQ9Y620 910 aa21.93■■□□□ 1.1
R3HDM4-206ENST00000590454 NYNRINQ9P2P1 1898 aaKnown RBP21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 CBX4O00257 560 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 ATP5BP06576 529 aaKnown RBP21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 CTNNA2P26232 953 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 NTSR1P30989 418 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 ENPP2Q13822 863 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 MAP7D1Q3KQU3 841 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 FNDC3BQ53EP0 1204 aaKnown RBP21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 PEAR1Q5VY43 1037 aaPredicted RBP21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 KATNAL2Q8IYT4 538 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 DCAF4L2Q8NA75 395 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 CEP76Q8TAP6 659 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 KCNV2Q8TDN2 545 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 RNF157Q96PX1 679 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 AMFRQ9UKV5 643 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 SLC6A14Q9UN76 642 aa21.92■■□□□ 1.1
R3HDM4-206ENST00000590454 TTC34A8MYJ7 566 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 K7ERQ8 282 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 DDX3YO15523 660 aaKnown RBP21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 CFIP05156 583 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 CDKN2BP42772 138 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 ARF5P84085 180 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 DUOXA1Q1HG43 343 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 NCBP2-AS2Q69YL0 99 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 AADACL2Q6P093 401 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 ARHGAP36Q6ZRI8 547 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 MAP7D3Q8IWC1 876 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 SYCE1Q8N0S2 351 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 PGBD3Q8N328 593 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 HMGB4Q8WW32 186 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 GABRG3Q99928 467 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 GTPBP2Q9BX10 602 aaKnown RBP21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 TMEM245Q9H330 911 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 PLA2G4CQ9UP65 541 aa21.91■■□□□ 1.1
R3HDM4-206ENST00000590454 ATXN2Q99700 1313 aaKnown RBP21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 A0A1W2PQF6 199 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 MFSD11O43934 449 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 OPHN1O60890 802 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 CD160O95971 181 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 ASLP04424 464 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 KRT10P13645 584 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 ITPKAP23677 461 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 PAPOLAP51003 745 aaKnown RBP21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 DNA2P51530 1060 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 NDST2P52849 883 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 ADCY2Q08462 1091 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 HNRNPDQ14103 355 aaKnown RBP21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 TAZQ16635 292 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 ZNF423Q2M1K9 1284 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 TMCO3Q6UWJ1 677 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 SERPINA13PQ6UXR4 307 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 SPOCD1Q6ZMY3 1216 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 PROSER1Q86XN7 944 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 CHCHD4Q8N4Q1 142 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 HERPUD2Q9BSE4 406 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 C2orf49Q9BVC5 232 aaPredicted RBP21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 CD248Q9HCU0 757 aa21.9■■□□□ 1.1
R3HDM4-206ENST00000590454 ZFYVE26Q68DK2 2539 aa21.89■■□□□ 1.1
R3HDM4-206ENST00000590454 DFFAO00273 331 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 SMAD6O43541 496 aaKnown RBP21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 MAP3K6O95382 1288 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 SRPRAP08240 638 aaKnown RBP21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 HOXB2P14652 356 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 VAV1P15498 845 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 YBEYP58557 167 aaPredicted RBP21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 SULT2A1Q06520 285 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 SERINC3Q13530 473 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 PARP15Q460N3 678 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 RABEPKQ7Z6M1 372 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 ZNF354CQ86Y25 554 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 HES6Q96HZ4 224 aa21.89■■□□□ 1.09
R3HDM4-206ENST00000590454 TCRBV21S2A2A0A5A6 115 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 CCDC66A2RUB6 948 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 J3KR12 359 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 ZSCAN12O43309 604 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 KDELR3O43731 214 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 ZRANB2O95218 330 aaKnown RBP eCLIP21.88■■□□□ 1.091e-7■■■■□ 19.3
R3HDM4-206ENST00000590454 CAPNS1P04632 268 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 EPHX1P07099 455 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 SERPINF2P08697 491 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 PYGMP11217 842 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 SRCP12931 536 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 GBE1Q04446 702 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 SLC10A2Q12908 348 aaPredicted RBP21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 ZNF211Q13398 564 aaPredicted RBP21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 PAFAH1B3Q15102 231 aaKnown RBP21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 DCAF12L1Q5VU92 463 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 KAZNQ674X7 775 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 TRMT11Q7Z4G4 463 aaKnown RBP21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 RAB44Q7Z6P3 723 aaPredicted RBP21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 RFX6Q8HWS3 928 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 RCOR2Q8IZ40 523 aa21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 C17orf53Q8N3J3 647 aaPredicted RBP21.88■■□□□ 1.09
R3HDM4-206ENST00000590454 PLD5Q8N7P1 536 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms