RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 HEATR9A2RTY3 570 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 HTR3EA5X5Y0 456 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 KCNK1O00180 336 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 TRIM24O15164 1050 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 MPOP05164 745 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 NME3Q13232 169 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 ZNF460Q14592 562 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 PPP4R4Q6NUP7 873 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 KDM1BQ8NB78 822 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.98■□□□□ 0.15
MBD1-222ENST00000590208 SLC7A14Q8TBB6 771 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 APOL2Q9BQE5 337 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 UNC93B1Q9H1C4 597 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 POLR1BQ9H9Y6 1135 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 CACNA2D2Q9NY47 1150 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 ADAM28Q9UKQ2 775 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 TRIM17Q9Y577 477 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 ZCWPW2A0A1B0GU75 182 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 SDHDO14521 159 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 DPYSL4O14531 572 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 ZNF182P17025 639 aaPredicted RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 ADSLP30566 484 aaPredicted RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 GRIA3P42263 894 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 SLC6A3Q01959 620 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 LAMTOR4Q0VGL1 99 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 LRP8Q14114 963 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 GRM3Q14832 879 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 SPANXN3Q5MJ09 141 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 PPP1R26Q5T8A7 1209 aaPredicted RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 JADE1Q6IE81 842 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 RWDD4Q6NW29 188 aaKnown RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 TMEM53Q6P2H8 277 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 OFCC1Q8IZS5 231 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 ZNF567Q8N184 647 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 LPAR1Q92633 364 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 SGF29Q96ES7 293 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 FBXL20Q96IG2 436 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 LPIN3Q9BQK8 851 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 NAT9Q9BTE0 207 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 NIFKQ9BYG3 293 aaKnown RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 RUVBL2Q9Y230 463 aaKnown RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 ZNF646O15015 1829 aaPredicted RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 LACTBL1A8MY62 500 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 DLX3O60479 287 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 YAP1P46937 504 aaKnown RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 CYP2A13Q16696 494 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 PPP1R3AQ16821 1122 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 REP15Q6BDI9 236 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 TTC30AQ86WT1 665 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 EPHX4Q8IUS5 362 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 HNRNPABQ99729 332 aaKnown RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 RMI1Q9H9A7 625 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 IARS2Q9NSE4 1012 aaKnown RBP15.98■□□□□ 0.15
MBD1-222ENST00000590208 AURKCQ9UQB9 309 aa15.98■□□□□ 0.15
MBD1-222ENST00000590208 TRIM64CA6NLI5 447 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 INO80B-WBP1J3KQ70 363 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 H2AFYO75367 372 aaKnown RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 HNRNPLP14866 589 aaKnown RBP eCLIP15.97■□□□□ 0.15
MBD1-222ENST00000590208 ZNF12P17014 697 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 GNA12Q03113 381 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 TARBP2Q15633 366 aaKnown RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 AGKQ53H12 422 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 CERCAMQ5T4B2 595 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 LCLAT1Q6UWP7 414 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 MPZL3Q6UWV2 235 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 RPS27LQ71UM5 84 aaKnown RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 FSTL5Q8N475 847 aaPredicted RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 OR9I1Q8NGQ6 314 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 C1QTNF1Q9BXJ1 281 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 TSPYL2Q9H2G4 693 aaPredicted RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 RPF1Q9H9Y2 349 aaKnown RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 TPH1P17752 444 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 EFNA5P52803 228 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 TRAF2Q12933 501 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 NEDD8Q15843 81 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 ZNF362Q5T0B9 420 aaPredicted RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 ATF7IP2Q5U623 682 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 EGFLAMQ63HQ2 1017 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 ANKRD26P1Q6NSI1 321 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 PID1Q7Z2X4 250 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 SLC15A4Q8N697 577 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 DNAAF3Q8N9W5 541 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 UHRF1Q96T88 793 aaPredicted RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 ADI1Q9BV57 179 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 SOX17Q9H6I2 414 aaPredicted RBP15.97■□□□□ 0.15
MBD1-222ENST00000590208 VTI1BQ9UEU0 232 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 PCNTO95613 3336 aa15.97■□□□□ 0.15
MBD1-222ENST00000590208 MT-CO1P00395 513 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 ATP6V1B2P21281 511 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 ACADVLP49748 655 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 TNK2Q07912 1038 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 CYGBQ8WWM9 190 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 HPDLQ96IR7 371 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 CDHR1Q96JP9 859 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 IL22Q9GZX6 179 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 LRRC40Q9H9A6 602 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 CHRAC1Q9NRG0 131 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 UTP6Q9NYH9 597 aaKnown RBP15.96■□□□□ 0.15
MBD1-222ENST00000590208 XPR1Q9UBH6 696 aa15.96■□□□□ 0.15
MBD1-222ENST00000590208 VANGL2Q9ULK5 521 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms