RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 SERAC1Q96JX3 654 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 MYOCQ99972 504 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 HEPHQ9BQS7 1158 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 RETREG1Q9H6L5 497 aa18.36■□□□□ 0.53
CIRBP-227ENST00000590188 HECAQ9UBI9 543 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-227ENST00000590188 SLC7A4O43246 635 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 DAPK3O43293 454 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 RNGTTO60942 597 aaKnown RBP18.35■□□□□ 0.53
CIRBP-227ENST00000590188 WNT1P04628 370 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 CEACAM1P13688 526 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 TAS2R38P59533 333 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 RACK1P63244 317 aaKnown RBP18.35■□□□□ 0.53
CIRBP-227ENST00000590188 FAM193AP78312 1265 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 IL9RQ01113 521 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 SMTNL2Q2TAL5 461 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 PRAMEF14Q5SWL7 426 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 ALKBH5Q6P6C2 394 aaKnown RBP18.35■□□□□ 0.53
CIRBP-227ENST00000590188 IL27RAQ6UWB1 636 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 CYP4V2Q6ZWL3 525 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-227ENST00000590188 PIP4P1Q86T03 277 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 PRPF39Q86UA1 669 aaKnown RBP18.35■□□□□ 0.53
CIRBP-227ENST00000590188 FNIP1Q8TF40 1166 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 FAM131CQ96AQ9 280 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 NUP85Q9BW27 656 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 ZWILCHQ9H900 591 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 OSGEPQ9NPF4 335 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 TM7SF3Q9NS93 570 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 CA5BQ9Y2D0 317 aa18.35■□□□□ 0.53
CIRBP-227ENST00000590188 WASH4PA8MWX3 477 aa18.34■□□□□ 0.53
CIRBP-227ENST00000590188 KRIT1O00522 736 aa18.34■□□□□ 0.53
CIRBP-227ENST00000590188 FGF10O15520 208 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-227ENST00000590188 TMCC1O94876 653 aa18.34■□□□□ 0.53
CIRBP-227ENST00000590188 EIF4A3P38919 411 aaKnown RBP18.34■□□□□ 0.53
CIRBP-227ENST00000590188 GEMIN4P57678 1058 aaKnown RBP18.34■□□□□ 0.53
CIRBP-227ENST00000590188 FOXC1Q12948 553 aa18.34■□□□□ 0.53
CIRBP-227ENST00000590188 SPECC1LQ69YQ0 1117 aa18.34■□□□□ 0.53
CIRBP-227ENST00000590188 ERN2Q76MJ5 926 aaKnown RBP18.34■□□□□ 0.53
CIRBP-227ENST00000590188 HSPH1Q92598 858 aa18.34■□□□□ 0.53
CIRBP-227ENST00000590188 PPP1R16AQ96I34 528 aa18.34■□□□□ 0.53
CIRBP-227ENST00000590188 ANAPC7Q9UJX3 599 aa18.34■□□□□ 0.53
CIRBP-227ENST00000590188 A0A1W2PQU0 124 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 C10orf142B7Z368 130 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 H0Y8X5 98 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 PCDH8O95206 1070 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 PRLRP16471 622 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 IL1R2P27930 398 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 CD38P28907 300 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 SIM1P81133 766 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-227ENST00000590188 SERINC3Q13530 473 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 RFX8Q6ZV50 586 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 PARS2Q7L3T8 475 aaKnown RBP18.33■□□□□ 0.52
CIRBP-227ENST00000590188 NAXDQ8IW45 347 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 OR2AP1Q8NGE2 309 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 SETD7Q8WTS6 366 aaKnown RBP18.33■□□□□ 0.52
CIRBP-227ENST00000590188 EXOC2Q96KP1 924 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 SLC39A8Q9C0K1 460 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 KDM4CQ9H3R0 1056 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 FZD3Q9NPG1 666 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 CHD5Q8TDI0 1954 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 TMEM131Q92545 1883 aa18.33■□□□□ 0.52
CIRBP-227ENST00000590188 A0A1W2PR77 199 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 J3KR12 359 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 SLC31A1O15431 190 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 LATO43561 262 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 TOP3BO95985 862 aaKnown RBP18.32■□□□□ 0.52
CIRBP-227ENST00000590188 GSRP00390 522 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 UGT2B4P06133 528 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 ERCC2P18074 760 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 CTSKP43235 329 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 SSR1P43307 286 aaKnown RBP18.32■□□□□ 0.52
CIRBP-227ENST00000590188 NEK3P51956 506 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 YBEYP58557 167 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-227ENST00000590188 RHOAP61586 193 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 SNRPD1P62314 119 aaKnown RBP18.32■□□□□ 0.52
CIRBP-227ENST00000590188 PARP15Q460N3 678 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 TXNRD3NBQ6F5E7 133 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 NAPEPLDQ6IQ20 393 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 FBXL19Q6PCT2 694 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 TRIM69Q86WT6 500 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 VSTM4Q8IW00 320 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 UMODL1-AS1Q8N2C9 162 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 ISG20Q96AZ6 181 aaKnown RBP18.32■□□□□ 0.52
CIRBP-227ENST00000590188 PACSIN1Q9BY11 444 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 DEF6Q9H4E7 631 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 PREBQ9HCU5 417 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 MFHAS1Q9Y4C4 1052 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 PCDHB9Q9Y5E1 797 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 NCOR2Q9Y618 2525 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 CNOT1A5YKK6 2376 aaKnown RBP18.32■□□□□ 0.52
CIRBP-227ENST00000590188 CACNA1EQ15878 2313 aa18.32■□□□□ 0.52
CIRBP-227ENST00000590188 ZSCAN5CA6NGD5 496 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-227ENST00000590188 UPK3BL1B0FP48 263 aa18.31■□□□□ 0.52
CIRBP-227ENST00000590188 UPK3BL2E5RIL1 263 aa18.31■□□□□ 0.52
CIRBP-227ENST00000590188 DFFAO00273 331 aa18.31■□□□□ 0.52
CIRBP-227ENST00000590188 VILLO15195 856 aa18.31■□□□□ 0.52
CIRBP-227ENST00000590188 CYP1A2P05177 515 aa18.31■□□□□ 0.52
CIRBP-227ENST00000590188 ADRB3P13945 408 aa18.31■□□□□ 0.52
CIRBP-227ENST00000590188 SPINK2P20155 84 aa18.31■□□□□ 0.52
CIRBP-227ENST00000590188 ITGB7P26010 798 aa18.31■□□□□ 0.52
CIRBP-227ENST00000590188 PMLP29590 882 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms