RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 RAD51BO15315 384 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 LRIG2O94898 1065 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 GIMD1P0DJR0 217 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 PTPN9P43378 593 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 DNA2P51530 1060 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 CCNHP51946 323 aaPredicted RBP18.36■□□□□ 0.53
H3F3B-209ENST00000589949 NRG1Q02297 640 aaPredicted RBP18.36■□□□□ 0.53
H3F3B-209ENST00000589949 COL28A1Q2UY09 1125 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 PROX2Q3B8N5 592 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 CARD16Q5EG05 197 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 RETSATQ6NUM9 610 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 FBXL19Q6PCT2 694 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 KDM7AQ6ZMT4 941 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 TMPRSS12Q86WS5 348 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 PYROXD2Q8N2H3 581 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 OXR1Q8N573 874 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 PCDH20Q8N6Y1 951 aaKnown RBP18.36■□□□□ 0.53
H3F3B-209ENST00000589949 OR6K2Q8NGY2 324 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 CHD5Q8TDI0 1954 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 ARHGEF2Q92974 986 aaKnown RBP18.36■□□□□ 0.53
H3F3B-209ENST00000589949 BMFQ96LC9 184 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 TM6SF2Q9BZW4 377 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 CEP44Q9C0F1 390 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 OSBPL2Q9H1P3 480 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 TMEM51Q9NW97 253 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 DNAI1Q9UI46 699 aa18.36■□□□□ 0.53
H3F3B-209ENST00000589949 TCRBV5S1A1TA0A578 114 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 SIGLEC6O43699 453 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 PCDH8O95206 1070 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 ADRB3P13945 408 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 SDC4P31431 198 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 SLC20A2Q08357 652 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 CLEC16AQ2KHT3 1053 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 RWDD4Q6NW29 188 aaKnown RBP18.35■□□□□ 0.53
H3F3B-209ENST00000589949 PARS2Q7L3T8 475 aaKnown RBP18.35■□□□□ 0.53
H3F3B-209ENST00000589949 ABI3BPQ7Z7G0 1075 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 PDCD7Q8N8D1 485 aaKnown RBP18.35■□□□□ 0.53
H3F3B-209ENST00000589949 NETO2Q8NC67 525 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 FAM172AQ8WUF8 416 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 HNRNPLLQ8WVV9 542 aaKnown RBP18.35■□□□□ 0.53
H3F3B-209ENST00000589949 HEPHQ9BQS7 1158 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 NOL6Q9H6R4 1146 aaKnown RBP18.35■□□□□ 0.53
H3F3B-209ENST00000589949 DYRK4Q9NR20 520 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 LIMA1Q9UHB6 759 aaKnown RBP18.35■□□□□ 0.53
H3F3B-209ENST00000589949 GGT7Q9UJ14 662 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 FADS3Q9Y5Q0 445 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 KNTC1P50748 2209 aa18.35■□□□□ 0.53
H3F3B-209ENST00000589949 POM121BA6NF01 834 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 LGALS16A8MUM7 142 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 SPINT1O43278 529 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 PLEKP08567 350 aaPredicted RBP18.34■□□□□ 0.53
H3F3B-209ENST00000589949 RHOQP17081 205 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 HNRNPA2B1P22626 353 aaKnown RBP18.34■□□□□ 0.53
H3F3B-209ENST00000589949 DGKAP23743 735 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 ITGB7P26010 798 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 L1CAMP32004 1257 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 STAT1P42224 750 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 ABL2P42684 1182 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 RECQLP46063 649 aaPredicted RBP18.34■□□□□ 0.53
H3F3B-209ENST00000589949 NEK3P51956 506 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 TARDBPQ13148 414 aaKnown RBP eCLIP18.34■□□□□ 0.53
H3F3B-209ENST00000589949 NCAPHQ15003 741 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 ZNF542PQ5EBM4 170 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 HES3Q5TGS1 186 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 WDR59Q6PJI9 974 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 TRIM72Q6ZMU5 477 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 STRADAQ7RTN6 431 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 PHF13Q86YI8 300 aaPredicted RBP18.34■□□□□ 0.53
H3F3B-209ENST00000589949 CALN1Q9BXU9 219 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 KLC2Q9H0B6 622 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 ZDHHC6Q9H6R6 413 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 GPR27Q9NS67 375 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 KLHL11Q9NVR0 708 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 TMEM248Q9NWD8 314 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 ADAM22Q9P0K1 906 aa18.34■□□□□ 0.53
H3F3B-209ENST00000589949 HECAQ9UBI9 543 aaPredicted RBP18.34■□□□□ 0.53
H3F3B-209ENST00000589949 URB1O60287 2271 aaKnown RBP18.33■□□□□ 0.53
H3F3B-209ENST00000589949 MAGEC1O60732 1142 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 PAK4O96013 591 aaPredicted RBP18.33■□□□□ 0.52
H3F3B-209ENST00000589949 C1SP09871 688 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 KRT3P12035 628 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 MYF5P13349 255 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 JUPP14923 745 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 CKMT2P17540 419 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 AKT2P31751 481 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 MAPKAPK2P49137 400 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 GSCP56915 257 aaPredicted RBP18.33■□□□□ 0.52
H3F3B-209ENST00000589949 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
H3F3B-209ENST00000589949 TPRG1LQ5T0D9 272 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 FKBP15Q5T1M5 1219 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 Q6ZSR6 202 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 MON1BQ7L1V2 547 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 BAP1Q92560 729 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 ISG20Q96AZ6 181 aaKnown RBP18.33■□□□□ 0.52
H3F3B-209ENST00000589949 CRELD1Q96HD1 420 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 KLF6Q99612 283 aaPredicted RBP18.33■□□□□ 0.52
H3F3B-209ENST00000589949 SLC17A9Q9BYT1 436 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 ITM2BQ9Y287 266 aa18.33■□□□□ 0.52
H3F3B-209ENST00000589949 TRPM6Q9BX84 2022 aa18.32■□□□□ 0.52
H3F3B-209ENST00000589949 MYLKQ15746 1914 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms