RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 CD38P28907 300 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 MIPP30301 263 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 CCNHP51946 323 aaPredicted RBP21.12■□□□□ 0.97
MBD3-205ENST00000589064 GEMIN4P57678 1058 aaKnown RBP21.12■□□□□ 0.97
MBD3-205ENST00000589064 TPI1P60174 286 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 CCDC15Q0P6D6 951 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 FOXC1Q12948 553 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 NFKBIBQ15653 356 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 PRAMEF14Q5SWL7 426 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 ERN2Q76MJ5 926 aaKnown RBP21.12■□□□□ 0.97
MBD3-205ENST00000589064 RYBPQ8N488 228 aaPredicted RBP21.12■□□□□ 0.97
MBD3-205ENST00000589064 FNIP1Q8TF40 1166 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 SETD7Q8WTS6 366 aaKnown RBP21.12■□□□□ 0.97
MBD3-205ENST00000589064 SKA1Q96BD8 255 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 HMCESQ96FZ2 354 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 CNTNAP3BQ96NU0 1288 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 HDAC8Q9BY41 377 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 CNTNAP3Q9BZ76 1288 aa21.12■□□□□ 0.97
MBD3-205ENST00000589064 MRPL47Q9HD33 250 aaKnown RBP21.12■□□□□ 0.97
MBD3-205ENST00000589064 PRPSAP2O60256 369 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 RNGTTO60942 597 aaKnown RBP21.11■□□□□ 0.97
MBD3-205ENST00000589064 CASP14P31944 242 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 GKP32189 559 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 YBEYP58557 167 aaPredicted RBP21.11■□□□□ 0.97
MBD3-205ENST00000589064 TRIP6Q15654 476 aaKnown RBP21.11■□□□□ 0.97
MBD3-205ENST00000589064 VPS36Q86VN1 386 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 TRIM69Q86WT6 500 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 PLPP6Q8IY26 295 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 UMODL1-AS1Q8N2C9 162 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 NETO2Q8NC67 525 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 OR6K2Q8NGY2 324 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 SNRNP25Q9BV90 132 aaKnown RBP21.11■□□□□ 0.97
MBD3-205ENST00000589064 ZDHHC6Q9H6R6 413 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 PREBQ9HCU5 417 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 PCDHB9Q9Y5E1 797 aa21.11■□□□□ 0.97
MBD3-205ENST00000589064 TOP3BO95985 862 aaKnown RBP21.1■□□□□ 0.97
MBD3-205ENST00000589064 HNRNPDQ14103 355 aaKnown RBP21.1■□□□□ 0.97
MBD3-205ENST00000589064 SUZ12Q15022 739 aaKnown RBP21.1■□□□□ 0.97
MBD3-205ENST00000589064 ZNF423Q2M1K9 1284 aa21.1■□□□□ 0.97
MBD3-205ENST00000589064 NAPEPLDQ6IQ20 393 aa21.1■□□□□ 0.97
MBD3-205ENST00000589064 DBX2Q6ZNG2 339 aa21.1■□□□□ 0.97
MBD3-205ENST00000589064 KLK6Q92876 244 aa21.1■□□□□ 0.97
MBD3-205ENST00000589064 PPP1R16AQ96I34 528 aa21.1■□□□□ 0.97
MBD3-205ENST00000589064 KCTD15Q96SI1 283 aaPredicted RBP21.1■□□□□ 0.97
MBD3-205ENST00000589064 TSPY26PQ9H489 355 aa21.1■□□□□ 0.97
MBD3-205ENST00000589064 PCDHGB2Q9Y5G2 931 aa21.1■□□□□ 0.97
MBD3-205ENST00000589064 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.1■□□□□ 0.974e-6■■□□□ 12.6
MBD3-205ENST00000589064 CACNA1EQ15878 2313 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 A0A087X0T9 212 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 A0A1W2PQU0 124 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 ZSCAN5CA6NGD5 496 aaPredicted RBP21.09■□□□□ 0.97
MBD3-205ENST00000589064 EEF2KO00418 725 aaKnown RBP21.09■□□□□ 0.97
MBD3-205ENST00000589064 FGF10O15520 208 aaPredicted RBP21.09■□□□□ 0.97
MBD3-205ENST00000589064 LRCH4O75427 683 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 PCDH8O95206 1070 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 TPM3P06753 285 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 FAM228BP0C875 321 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 HTR7P34969 479 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 SHC2P98077 582 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 SERINC3Q13530 473 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 MYLK3Q32MK0 819 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 PARP15Q460N3 678 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 ATXN7L2Q5T6C5 722 aaPredicted RBP21.09■□□□□ 0.97
MBD3-205ENST00000589064 NEK5Q6P3R8 708 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 CYP4V2Q6ZWL3 525 aaPredicted RBP21.09■□□□□ 0.97
MBD3-205ENST00000589064 OR2AP1Q8NGE2 309 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 THAP2Q9H0W7 228 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 PCOLCE2Q9UKZ9 415 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 DMTF1Q9Y222 760 aa21.09■□□□□ 0.97
MBD3-205ENST00000589064 TLR4O00206 839 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 KRIT1O00522 736 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 SLC31A1O15431 190 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 DAPK3O43293 454 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 CBFA2T3O75081 653 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 TMCC1O94876 653 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 POP4O95707 220 aaKnown RBP21.08■□□□□ 0.97
MBD3-205ENST00000589064 GSRP00390 522 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 SPINK2P20155 84 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 NUDT1P36639 197 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 NEK3P51956 506 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 SNRPD1P62314 119 aaKnown RBP21.08■□□□□ 0.97
MBD3-205ENST00000589064 IL9RQ01113 521 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 STAT4Q14765 748 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 SLC45A4Q5BKX6 768 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 FBXL19Q6PCT2 694 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 RHBDD1Q8TEB9 315 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 CELF6Q96J87 481 aaKnown RBP21.08■□□□□ 0.97
MBD3-205ENST00000589064 CA5BQ9Y2D0 317 aa21.08■□□□□ 0.97
MBD3-205ENST00000589064 EIF3CLB5ME19 914 aaKnown RBP21.07■□□□□ 0.96
MBD3-205ENST00000589064 PRLRP16471 622 aa21.07■□□□□ 0.96
MBD3-205ENST00000589064 ITGB7P26010 798 aa21.07■□□□□ 0.96
MBD3-205ENST00000589064 SETMARQ53H47 684 aaPredicted RBP21.07■□□□□ 0.96
MBD3-205ENST00000589064 INO80DQ53TQ3 878 aaPredicted RBP21.07■□□□□ 0.96
MBD3-205ENST00000589064 PPP6R3Q5H9R7 873 aaPredicted RBP21.07■□□□□ 0.96
MBD3-205ENST00000589064 CCDC122Q5T0U0 273 aa21.07■□□□□ 0.96
MBD3-205ENST00000589064 ALKBH5Q6P6C2 394 aaKnown RBP21.07■□□□□ 0.96
MBD3-205ENST00000589064 RFX8Q6ZV50 586 aa21.07■□□□□ 0.96
MBD3-205ENST00000589064 HORMAD1Q86X24 394 aa21.07■□□□□ 0.96
MBD3-205ENST00000589064 MFSD2AQ8NA29 543 aa21.07■□□□□ 0.96
MBD3-205ENST00000589064 RNF214Q8ND24 703 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms