RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KRT35Q92764 455 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 FAM131CQ96AQ9 280 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 RNF25Q96BH1 459 aaPredicted RBP20.55■□□□□ 0.88
DDX39A-207ENST00000588542 LHX3Q9UBR4 397 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 IL36AQ9UHA7 158 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 FARP1Q9Y4F1 1045 aaPredicted RBP20.55■□□□□ 0.88
DDX39A-207ENST00000588542 LAMA1P25391 3075 aa20.55■□□□□ 0.88
DDX39A-207ENST00000588542 DOCK9Q9BZ29 2069 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 MACROD2A1Z1Q3 448 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 MAFKO60675 156 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 PEX11BO96011 259 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 RETP07949 1114 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 PTGER3P43115 390 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 RECQLP46063 649 aaPredicted RBP20.54■□□□□ 0.88
DDX39A-207ENST00000588542 SLC10A2Q12908 348 aaPredicted RBP20.54■□□□□ 0.88
DDX39A-207ENST00000588542 ARSIQ5FYB1 569 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 ATXN7L2Q5T6C5 722 aaPredicted RBP20.54■□□□□ 0.88
DDX39A-207ENST00000588542 SLC41A1Q8IVJ1 513 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 KATNAL2Q8IYT4 538 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 HDDC3Q8N4P3 179 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 DCLK2Q8N568 766 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 OR2AP1Q8NGE2 309 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 KIAA1524Q8TCG1 905 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 RUBCNQ92622 972 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 HEPHQ9BQS7 1158 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 GPR174Q9BXC1 333 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 NEUROG2Q9H2A3 272 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 SP110Q9HB58 689 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 HECAQ9UBI9 543 aaPredicted RBP20.54■□□□□ 0.88
DDX39A-207ENST00000588542 PI4KAP42356 2102 aa20.54■□□□□ 0.88
DDX39A-207ENST00000588542 GVINP1Q7Z2Y8 2422 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 C1QTNF3-AMACRE9PGA6 284 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 PLK4O00444 970 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 NDUFS2O75306 463 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 LEFTY1O75610 366 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 RNASEH2AO75792 299 aaKnown RBP20.53■□□□□ 0.88
DDX39A-207ENST00000588542 PRNPP04156 253 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 GKP32189 559 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 CDKN2BP42772 138 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 RHOAP61586 193 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 SNRPD1P62314 119 aaKnown RBP20.53■□□□□ 0.88
DDX39A-207ENST00000588542 GBE1Q04446 702 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 GALNT2Q10471 571 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 POM121L1PQ3SYA9 428 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 FAM46CQ5VWP2 391 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 SLC9A4Q6AI14 798 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 PLD5Q8N7P1 536 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 OR6K2Q8NGY2 324 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 GRIN3AQ8TCU5 1115 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 ARRDC3Q96B67 414 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 ZNF419Q96HQ0 510 aaPredicted RBP20.53■□□□□ 0.88
DDX39A-207ENST00000588542 PDLIM2Q96JY6 352 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 OMDQ99983 421 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 BTBD1Q9H0C5 482 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 NCDNQ9UBB6 729 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 GMEB2Q9UKD1 530 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 FZD4Q9ULV1 537 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 NCKAP1Q9Y2A7 1128 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 PCDHA3Q9Y5H8 950 aa20.53■□□□□ 0.88
DDX39A-207ENST00000588542 PALMO75781 387 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 MAP3K6O95382 1288 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 CTNNA1P35221 906 aaKnown RBP20.52■□□□□ 0.88
DDX39A-207ENST00000588542 DHPSP49366 369 aaPredicted RBP20.52■□□□□ 0.88
DDX39A-207ENST00000588542 CNTN1Q12860 1018 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 IFI16Q16666 785 aaKnown RBP20.52■□□□□ 0.88
DDX39A-207ENST00000588542 MYLK3Q32MK0 819 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 SPOCD1Q6ZMY3 1216 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 ARMCX6Q7L4S7 300 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 NT5DC3Q86UY8 548 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 ATPAF2Q8N5M1 289 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 GANCQ8TET4 914 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 ZNF599Q96NL3 588 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 ARRDC1-AS1Q9H2J1 176 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 ZDHHC6Q9H6R6 413 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 SGK2Q9HBY8 427 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 DTLQ9NZJ0 730 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 CAPN6Q9Y6Q1 641 aa20.52■□□□□ 0.88
DDX39A-207ENST00000588542 PLXNA2O75051 1894 aa20.52■□□□□ 0.87
DDX39A-207ENST00000588542 BCLAF3A2AJT9 711 aaKnown RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 C10orf142B7Z368 130 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 KPNA3O00505 521 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 POP4O95707 220 aaKnown RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 SEMA4FO95754 770 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 TGM1P22735 817 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 CTNNA2P26232 953 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 GARSP41250 739 aaKnown RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 RGRP47804 291 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 PEX5P50542 639 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 ZNF33AQ06730 810 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 SLC10A7Q0GE19 358 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 SFSWAPQ12872 951 aaKnown RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 RFTN1Q14699 578 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 AGBL4Q5VU57 503 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 LRRC49Q8IUZ0 686 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 RNF10Q8N5U6 811 aaKnown RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 TSEN2Q8NCE0 465 aaKnown RBP20.51■□□□□ 0.87
DDX39A-207ENST00000588542 CADM4Q8NFZ8 388 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 EXD1Q8NHP7 514 aa20.51■□□□□ 0.87
DDX39A-207ENST00000588542 EXOC2Q96KP1 924 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms