RNA–Protein interactions for RNA: ENST00000588237.5

GRN-213, Transcript of granulin precursor, human

TSL 5

Gene GRN, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-213	ENST00000588237	CARD16	Q5EG05	197 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	PPP1R15B	Q5SWA1	713 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	ARTN	Q5T4W7	220 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	AGBL4	Q5VU57	503 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	E4F1	Q66K89	784 aa	Predicted RBP	13.53	□□□□□ -0.24
GRN-213	ENST00000588237	DPY19L3	Q6ZPD9	716 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	NLRP14	Q86W24	1093 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	TMIE	Q8NEW7	156 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	RHBDD1	Q8TEB9	315 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	HEPH	Q9BQS7	1158 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	SYT11	Q9BT88	431 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	CEP44	Q9C0F1	390 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	ZDHHC6	Q9H6R6	413 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	CATSPERB	Q9H7T0	1116 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	EBF2	Q9HAK2	575 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	KLK13	Q9UKR3	277 aa		13.53	□□□□□ -0.24
GRN-213	ENST00000588237	TPX2	Q9ULW0	747 aa	Known RBP	13.53	□□□□□ -0.24
GRN-213	ENST00000588237	ADAMTS20	P59510	1910 aa		13.52	□□□□□ -0.24
GRN-213	ENST00000588237	SPEG	Q15772	3267 aa		13.52	□□□□□ -0.24
GRN-213	ENST00000588237	TRPM6	Q9BX84	2022 aa		13.52	□□□□□ -0.24
GRN-213	ENST00000588237	KNTC1	P50748	2209 aa		13.52	□□□□□ -0.24
GRN-213	ENST00000588237		H0Y8X5	98 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	DDX3X	O00571	662 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	6e-15	■■■■■ 40.2
GRN-213	ENST00000588237	VILL	O15195	856 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	DAPK3	O43293	454 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	BUB1	O43683	1085 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	RNGTT	O60942	597 aa	Known RBP	13.52	□□□□□ -0.25
GRN-213	ENST00000588237	LEFTY1	O75610	366 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	ZMPSTE24	O75844	475 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	PCDH8	O95206	1070 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	ZNF883	P0CG24	379 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	GZMA	P12544	262 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	PRKCI	P41743	596 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	CCNH	P51946	323 aa	Predicted RBP	13.52	□□□□□ -0.25
GRN-213	ENST00000588237	AIF1	P55008	147 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	TPI1	P60174	286 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	FAM193A	P78312	1265 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	IL9R	Q01113	521 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	OGDH	Q02218	1023 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	NFKBIB	Q15653	356 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	FIGN	Q5HY92	759 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	KCNT1	Q5JUK3	1230 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	PRAMEF14	Q5SWL7	426 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	PLEKHA7	Q6IQ23	1121 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	ERN2	Q76MJ5	926 aa	Known RBP	13.52	□□□□□ -0.25
GRN-213	ENST00000588237	VPS36	Q86VN1	386 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	RTL3	Q8N8U3	475 aa	Known RBP	13.52	□□□□□ -0.25
GRN-213	ENST00000588237	KLK6	Q92876	244 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	ARRDC3	Q96B67	414 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	TRIM11	Q96F44	468 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	MYOC	Q99972	504 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	ORAI3	Q9BRQ5	295 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	TTYH3	Q9C0H2	523 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	PREB	Q9HCU5	417 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	GPATCH2L	Q9NWQ4	482 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	IFNK	Q9P0W0	207 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	HECA	Q9UBI9	543 aa	Predicted RBP	13.52	□□□□□ -0.25
GRN-213	ENST00000588237	PCSK1N	Q9UHG2	260 aa		13.52	□□□□□ -0.25
GRN-213	ENST00000588237	URB1	O60287	2271 aa	Known RBP	13.52	□□□□□ -0.25
GRN-213	ENST00000588237	TDRD6	O60522	2096 aa	Known RBP	13.51	□□□□□ -0.25
GRN-213	ENST00000588237	KRIT1	O00522	736 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	WNT9A	O14904	365 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	SLC31A1	O15431	190 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	FLRT2	O43155	660 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	PRPSAP2	O60256	369 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	TPM3	P06753	285 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	CTSK	P43235	329 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	SNRPD1	P62314	119 aa	Known RBP	13.51	□□□□□ -0.25
GRN-213	ENST00000588237	STAT4	Q14765	748 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	SETMAR	Q53H47	684 aa	Predicted RBP	13.51	□□□□□ -0.25
GRN-213	ENST00000588237	PIP5KL1	Q5T9C9	394 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	NAPEPLD	Q6IQ20	393 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	FBXL19	Q6PCT2	694 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	OR6K2	Q8NGY2	324 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	DHX35	Q9H5Z1	703 aa	Known RBP	13.51	□□□□□ -0.25
GRN-213	ENST00000588237	MRPL47	Q9HD33	250 aa	Known RBP	13.51	□□□□□ -0.25
GRN-213	ENST00000588237	GDF3	Q9NR23	364 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	AP4E1	Q9UPM8	1137 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	LUC7L2	Q9Y383	392 aa	Known RBP	13.51	□□□□□ -0.25
GRN-213	ENST00000588237	BZW2	Q9Y6E2	419 aa	Known RBP	13.51	□□□□□ -0.25
GRN-213	ENST00000588237	SCIN	Q9Y6U3	715 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237	WASF2	Q9Y6W5	498 aa		13.51	□□□□□ -0.25
GRN-213	ENST00000588237		A0A1W2PQJ5	194 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237		A0A1W2PQU0	124 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	TMEM191C	A6NGB0	347 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.5	□□□□□ -0.25
GRN-213	ENST00000588237	GOLGA8CP	A6NN73	597 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	RASA4B	C9J798	803 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	TLR4	O00206	839 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	RNF103	O00237	685 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	EEF2K	O00418	725 aa	Known RBP	13.5	□□□□□ -0.25
GRN-213	ENST00000588237	FGF10	O15520	208 aa	Predicted RBP	13.5	□□□□□ -0.25
GRN-213	ENST00000588237	RASA4	O43374	803 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	LAT	O43561	262 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	KDELR3	O43731	214 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	DFNA5	O60443	496 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	ZNF821	O75541	412 aa	Predicted RBP	13.5	□□□□□ -0.25
GRN-213	ENST00000588237	CD160	O95971	181 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	WNT1	P04628	370 aa		13.5	□□□□□ -0.25
GRN-213	ENST00000588237	MYBL1	P10243	752 aa		13.5	□□□□□ -0.25

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