RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 SRGAP2O75044 1071 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 CHRNB2P17787 502 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 GLDCP23378 1020 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 DGKAP23743 735 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 SOX5P35711 763 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 NUMBP49757 651 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 RPS21P63220 83 aaKnown RBP13.6□□□□□ -0.23
PKN1-211ENST00000588200 CCDC14Q49A88 953 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 NAA35Q5VZE5 725 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 LINGO4Q6UY18 593 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 GCNT7Q6ZNI0 430 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 PDZD3Q86UT5 571 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 DCBLD1Q8N8Z6 715 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 RXFP2Q8WXD0 754 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 FEM1CQ96JP0 617 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 SLC17A9Q9BYT1 436 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 USP29Q9HBJ7 922 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 ATP13A1Q9HD20 1204 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 SIK3Q9Y2K2 1263 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 FADS3Q9Y5Q0 445 aa13.6□□□□□ -0.23
PKN1-211ENST00000588200 FAM149AA5PLN7 773 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 ZSCAN5CA6NGD5 496 aaPredicted RBP13.59□□□□□ -0.23
PKN1-211ENST00000588200 GOLGA8SH3BPF8 625 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 SLC31A1O15431 190 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 TSPAN6O43657 245 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 BNIP3LO60238 219 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 PIAS2O75928 621 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 GP1BAP07359 652 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 CKMT1AP12532 417 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 ADRB3P13945 408 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 SDC4P31431 198 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 CCNHP51946 323 aaPredicted RBP13.59□□□□□ -0.23
PKN1-211ENST00000588200 TARDBPQ13148 414 aaKnown RBP eCLIP13.59□□□□□ -0.23
PKN1-211ENST00000588200 KRT31Q15323 416 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 COL28A1Q2UY09 1125 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 POM121L1PQ3SYA9 428 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
PKN1-211ENST00000588200 C2CD6Q53TS8 623 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 HSP90AA4PQ58FG1 418 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 HES3Q5TGS1 186 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 KYAT3Q6YP21 454 aaKnown RBP13.59□□□□□ -0.23
PKN1-211ENST00000588200 PHF13Q86YI8 300 aaPredicted RBP13.59□□□□□ -0.23
PKN1-211ENST00000588200 SLC22A18ASQ8N1D0 253 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 DENND6BQ8NEG7 585 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 OR13H1Q8NG92 308 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 CASKIN2Q8WXE0 1202 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 ARHGEF2Q92974 986 aaKnown RBP13.59□□□□□ -0.23
PKN1-211ENST00000588200 BMFQ96LC9 184 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 C1QTNF2Q9BXJ5 285 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 OSBPL1AQ9BXW6 950 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 TNKS2Q9H2K2 1166 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 METTL5Q9NRN9 209 aaKnown RBP13.59□□□□□ -0.23
PKN1-211ENST00000588200 CSNK1G3Q9Y6M4 447 aa13.59□□□□□ -0.23
PKN1-211ENST00000588200 ATMQ13315 3056 aa13.58□□□□□ -0.23
PKN1-211ENST00000588200 SPTY2D1-AS1A0A0U1RR47 76 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 NEMP2A6NFY4 417 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 SIGLEC16A6NMB1 481 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 A6NNZ2 444 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 PES1O00541 588 aaKnown RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 TRIM38O00635 465 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 TOR1BO14657 336 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 SCAMP1O15126 338 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 SIGLEC6O43699 453 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 GFPT2O94808 682 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 LRIG2O94898 1065 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 GSRP00390 522 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 KRT3P12035 628 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 HOXB3P14651 431 aaPredicted RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 ANP32AP39687 249 aaKnown RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 STAT1P42224 750 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 AIF1P55008 147 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 HDAC4P56524 1084 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 HNRNPKP61978 463 aaKnown RBP eCLIP13.58□□□□□ -0.244e-6■■■■□ 21.7
PKN1-211ENST00000588200 ATP11AP98196 1134 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 INSM1Q01101 510 aaPredicted RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 EMC1Q8N766 993 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 C3orf20Q8ND61 904 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 SNIP1Q8TAD8 396 aaKnown RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 SLC20A1Q8WUM9 679 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 ARHGEF26Q96DR7 871 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 TBATAQ96M53 351 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 KLF6Q99612 283 aaPredicted RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 SPON2Q9BUD6 331 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 DUSP23Q9BVJ7 150 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 VPS16Q9H269 839 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 NDFIP2Q9NV92 336 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 NLGN3Q9NZ94 848 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 LIMA1Q9UHB6 759 aaKnown RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 MFHAS1Q9Y4C4 1052 aa13.58□□□□□ -0.24
PKN1-211ENST00000588200 TDRD6O60522 2096 aaKnown RBP13.58□□□□□ -0.24
PKN1-211ENST00000588200 MGAQ8IWI9 3026 aa13.57□□□□□ -0.24
PKN1-211ENST00000588200 TCRBV5S1A1TA0A578 114 aa13.57□□□□□ -0.24
PKN1-211ENST00000588200 WASH4PA8MWX3 477 aa13.57□□□□□ -0.24
PKN1-211ENST00000588200 AREL1O15033 823 aa13.57□□□□□ -0.24
PKN1-211ENST00000588200 KDELR3O43731 214 aa13.57□□□□□ -0.24
PKN1-211ENST00000588200 PCDH8O95206 1070 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms