RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 DYNC1I1O14576 645 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 H2AFXP16104 143 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 FDFT1P37268 417 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 GRIA2P42262 883 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 DMC1Q14565 340 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 RFTN1Q14699 578 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 MORF4L2Q15014 288 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 RNASEH2BQ5TBB1 312 aaKnown RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 TMCO4Q5TGY1 634 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 MARC1Q5VT66 337 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ITPRIPL1Q6GPH6 555 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ARHGEF18Q6ZSZ5 1173 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 PID1Q7Z2X4 250 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 HOOK3Q86VS8 718 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 KLHDC8BQ8IXV7 354 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 NSMCE1Q8WV22 266 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 HNRNPLLQ8WVV9 542 aaKnown RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 IFT81Q8WYA0 676 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ACDQ96AP0 544 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 SLC25A13Q9UJS0 675 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 TTLL3Q9Y4R7 772 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 SHISA7A6NL88 538 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 K7ERQ8 282 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ZBTB24O43167 697 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 METTL18O95568 372 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 MT-CO1P00395 513 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 EGFP01133 1207 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 MYBL2P10244 700 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 CD68P34810 354 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 ITGA8P53708 1063 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ECT2LQ008S8 904 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 SLC10A7Q0GE19 358 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 SEMA5AQ13591 1074 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 PREPLQ4J6C6 727 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 INO80DQ53TQ3 878 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 IZUMO3Q5VZ72 239 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 FSTL4Q6MZW2 842 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 RETSATQ6NUM9 610 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 PPIL6Q8IXY8 311 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 FAM3CQ92520 227 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 CPT1BQ92523 772 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 EZH1Q92800 747 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 TTC17Q96AE7 1141 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 MSANTD3Q96H12 275 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ZNF419Q96HQ0 510 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 GBA3Q9H227 469 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ETNK1Q9HBU6 452 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 RAB6BQ9NRW1 208 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ELOVL2Q9NXB9 296 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 KLHL8Q9P2G9 620 aaPredicted RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 ANAPC5Q9UJX4 755 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 NFU1Q9UMS0 254 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 NDRG2Q9UN36 371 aaKnown RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 SHOC2Q9UQ13 582 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ERVW-1Q9UQF0 538 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 ATP8A1Q9Y2Q0 1164 aa15.17■□□□□ 0.02
NFIX-208ENST00000587260 FCF1Q9Y324 198 aaKnown RBP15.17■□□□□ 0.02
NFIX-208ENST00000587260 KRBA1A5PL33 1030 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 NEBLO76041 1014 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 TMCC1O94876 653 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 CD160O95971 181 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 ATP5BP06576 529 aaKnown RBP15.16■□□□□ 0.02
NFIX-208ENST00000587260 GLULP15104 373 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 SERPINH1P50454 418 aaKnown RBP15.16■□□□□ 0.02
NFIX-208ENST00000587260 PLTPP55058 493 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 SULT2A1Q06520 285 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 GRSF1Q12849 480 aaKnown RBP eCLIP15.16■□□□□ 0.02
NFIX-208ENST00000587260 CBLBQ13191 982 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 ZNF235Q14590 738 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 KCNJ11Q14654 390 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 LBRQ14739 615 aaKnown RBP15.16■□□□□ 0.02
NFIX-208ENST00000587260 EIF4HQ15056 248 aaKnown RBP15.16■□□□□ 0.02
NFIX-208ENST00000587260 TMEM196Q5HYL7 178 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 SUGP1Q8IWZ8 645 aaKnown RBP15.16■□□□□ 0.02
NFIX-208ENST00000587260 UBALD2Q8IYN6 164 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 SIX5Q8N196 739 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.16■□□□□ 0.02
NFIX-208ENST00000587260 NAT8LQ8N9F0 302 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 ATP11CQ8NB49 1132 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 FBXO25Q8TCJ0 367 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 ANKRD7Q92527 254 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 EXOC4Q96A65 974 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 EXOC2Q96KP1 924 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 AGAP3Q96P47 875 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 PPP1R2P1Q96PQ5 205 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 FCRL5Q96RD9 977 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 UHRF1Q96T88 793 aaPredicted RBP15.16■□□□□ 0.02
NFIX-208ENST00000587260 CINPQ9BW66 212 aaPredicted RBP15.16■□□□□ 0.02
NFIX-208ENST00000587260 FOXP3Q9BZS1 431 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 NEUROG2Q9H2A3 272 aa15.16■□□□□ 0.02
NFIX-208ENST00000587260 RBM22Q9NW64 420 aaKnown RBP eCLIP15.16■□□□□ 0.029e-7■■■■■ 36.6
NFIX-208ENST00000587260 F5H423 210 aaPredicted RBP15.15■□□□□ 0.02
NFIX-208ENST00000587260 K7EQS6 105 aa15.15■□□□□ 0.02
NFIX-208ENST00000587260 SMAD6O43541 496 aaKnown RBP15.15■□□□□ 0.02
NFIX-208ENST00000587260 ERLIN1O75477 346 aa15.15■□□□□ 0.02
NFIX-208ENST00000587260 DLDP09622 509 aaKnown RBP15.15■□□□□ 0.02
NFIX-208ENST00000587260 SRCP12931 536 aa15.15■□□□□ 0.02
NFIX-208ENST00000587260 MMP13P45452 471 aa15.15■□□□□ 0.02
NFIX-208ENST00000587260 GEMIN4P57678 1058 aaKnown RBP15.15■□□□□ 0.02
NFIX-208ENST00000587260 CDK16Q00536 496 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms