RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 VSTM4Q8IW00 320 aa18.2■□□□□ 0.5
ERBB2-221ENST00000584888 RTL3Q8N8U3 475 aaKnown RBP18.2■□□□□ 0.5
ERBB2-221ENST00000584888 SKA1Q96BD8 255 aa18.2■□□□□ 0.5
ERBB2-221ENST00000584888 PEBP4Q96S96 227 aa18.2■□□□□ 0.5
ERBB2-221ENST00000584888 DNAJC7Q99615 494 aa18.2■□□□□ 0.5
ERBB2-221ENST00000584888 SPON2Q9BUD6 331 aa18.2■□□□□ 0.5
ERBB2-221ENST00000584888 ATP13A1Q9HD20 1204 aa18.2■□□□□ 0.5
ERBB2-221ENST00000584888 AASDHPPTQ9NRN7 309 aa18.2■□□□□ 0.5
ERBB2-221ENST00000584888 DNAI1Q9UI46 699 aa18.2■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3DA0A087WVF3 549 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3IA0A087WXS9 549 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3EA0A087X179 549 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3KA0A087X1G2 549 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 A0A1B0GTQ1 180 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3FA6NER0 549 aaPredicted RBP18.19■□□□□ 0.5
ERBB2-221ENST00000584888 GOLGA8CPA6NN73 597 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3LB9A6J9 549 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 CBX4O00257 560 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TAF4O00268 1085 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 PLK4O00444 970 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 DKK1O94907 266 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 CTSLP07711 333 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3HP0C7X1 549 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 MIPP30301 263 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 HTR7P34969 479 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 ETFBP38117 255 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 SERPINH1P50454 418 aaKnown RBP18.19■□□□□ 0.5
ERBB2-221ENST00000584888 ASTE1Q2TB18 679 aaPredicted RBP18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3GQ6DHY5 549 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3CQ6IPX1 549 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 RETSATQ6NUM9 610 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 DSG4Q86SJ6 1040 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 VPS36Q86VN1 386 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TBC1D3Q8IZP1 549 aaPredicted RBP18.19■□□□□ 0.5
ERBB2-221ENST00000584888 RNF214Q8ND24 703 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 PIP4K2CQ8TBX8 421 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TMEM131Q92545 1883 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.19■□□□□ 0.5
ERBB2-221ENST00000584888 CEP44Q9C0F1 390 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 MRPL47Q9HD33 250 aaKnown RBP18.19■□□□□ 0.5
ERBB2-221ENST00000584888 MYO1AQ9UBC5 1043 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 TPX2Q9ULW0 747 aaKnown RBP18.19■□□□□ 0.5
ERBB2-221ENST00000584888 ZFHX4Q86UP3 3567 aa18.19■□□□□ 0.5
ERBB2-221ENST00000584888 A0A1W2PR77 199 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 EIF3CLB5ME19 914 aaKnown RBP18.18■□□□□ 0.5
ERBB2-221ENST00000584888 RNF103O00237 685 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 TNFSF14O43557 240 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 LATO43561 262 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 LRCH4O75427 683 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 CYP1A2P05177 515 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 DESP17661 470 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 CD38P28907 300 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 EPHB2P29323 1055 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 TRIM14Q14142 442 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 ACAP1Q15027 740 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 CA9Q16790 459 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 ERMARDQ5T6L9 678 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 FAM46CQ5VWP2 391 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 C22orf39Q6P5X5 142 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 ALKBH5Q6P6C2 394 aaKnown RBP18.18■□□□□ 0.5
ERBB2-221ENST00000584888 TMPRSS7Q7RTY8 843 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 PSTKQ8IV42 348 aaKnown RBP18.18■□□□□ 0.5
ERBB2-221ENST00000584888 PLPP6Q8IY26 295 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 UMODL1-AS1Q8N2C9 162 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 TMIEQ8NEW7 156 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 OR8K1Q8NGG5 319 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 VOPP1Q96AW1 172 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
ERBB2-221ENST00000584888 SERAC1Q96JX3 654 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 ELF4Q99607 663 aaPredicted RBP18.18■□□□□ 0.5
ERBB2-221ENST00000584888 EIF3CQ99613 913 aaKnown RBP18.18■□□□□ 0.5
ERBB2-221ENST00000584888 EPAS1Q99814 870 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 SNRNP25Q9BV90 132 aaKnown RBP18.18■□□□□ 0.5
ERBB2-221ENST00000584888 THAP2Q9H0W7 228 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 GPATCH2LQ9NWQ4 482 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 AP4E1Q9UPM8 1137 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 ACTL7AQ9Y615 435 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 PLXNA2O75051 1894 aa18.18■□□□□ 0.5
ERBB2-221ENST00000584888 SLC7A4O43246 635 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 KDELR3O43731 214 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 CREB3O43889 395 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 RAMP2O60895 175 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 RNF8O76064 485 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 CHRNA3P32297 505 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 PCK1P35558 622 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 EIF4A3P38919 411 aaKnown RBP18.17■□□□□ 0.5
ERBB2-221ENST00000584888 YBEYP58557 167 aaPredicted RBP18.17■□□□□ 0.5
ERBB2-221ENST00000584888 PPP2CBP62714 309 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 PPP2CAP67775 309 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
ERBB2-221ENST00000584888 POLD3Q15054 466 aaPredicted RBP18.17■□□□□ 0.5
ERBB2-221ENST00000584888 PROSER1Q86XN7 944 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 GATAD2AQ86YP4 633 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 PCDH20Q8N6Y1 951 aaKnown RBP18.17■□□□□ 0.5
ERBB2-221ENST00000584888 CHST14Q8NCH0 376 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 KCTD15Q96SI1 283 aaPredicted RBP18.17■□□□□ 0.5
ERBB2-221ENST00000584888 NCAPGQ9BPX3 1015 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 KLC2Q9H0B6 622 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 KDM4CQ9H3R0 1056 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 PCSK1NQ9UHG2 260 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms