RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 TRPM6Q9BX84 2022 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 SPEGQ15772 3267 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 C2CD4BA6NLJ0 364 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 FFAR2O15552 330 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 ZNF821O75541 412 aaPredicted RBP20.82■□□□□ 0.92
TOP3A-219ENST00000584887 C1SP09871 688 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 ADRB3P13945 408 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 ITGB7P26010 798 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 ETFBP38117 255 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 COL28A1Q2UY09 1125 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 HS1BP3Q53T59 392 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 SASS6Q6UVJ0 657 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 LEKR1Q6ZMV7 388 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 PTAR1Q7Z6K3 402 aaPredicted RBP20.82■□□□□ 0.92
TOP3A-219ENST00000584887 ZNF354CQ86Y25 554 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 CCDC185Q8N715 623 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 OR13H1Q8NG92 308 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 FAM172AQ8WUF8 416 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 TBC1D31Q96DN5 1066 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 SELENOOQ9BVL4 669 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 MAGEB5Q9BZ81 275 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 NDFIP2Q9NV92 336 aa20.82■□□□□ 0.92
TOP3A-219ENST00000584887 HECAQ9UBI9 543 aaPredicted RBP20.82■□□□□ 0.92
TOP3A-219ENST00000584887 TDRD6O60522 2096 aaKnown RBP20.82■□□□□ 0.92
TOP3A-219ENST00000584887 ATRXP46100 2492 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 FAM72CH0Y354 149 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 TRIM38O00635 465 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 SIGLEC6O43699 453 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 LRIG2O94898 1065 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 PLEKP08567 350 aaPredicted RBP20.81■□□□□ 0.92
TOP3A-219ENST00000584887 CDK4P11802 303 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 KRT3P12035 628 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 HOXB3P14651 431 aaPredicted RBP20.81■□□□□ 0.92
TOP3A-219ENST00000584887 RHOQP17081 205 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 CKMT2P17540 419 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 PTPN9P43378 593 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 MAPKAPK2P49137 400 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 FAM72AQ5TYM5 149 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 MANEALQ5VSG8 457 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 FAM72DQ6L9T8 149 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 GCNT7Q6ZNI0 430 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 PARS2Q7L3T8 475 aaKnown RBP20.81■□□□□ 0.92
TOP3A-219ENST00000584887 STRADAQ7RTN6 431 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 FAM72BQ86X60 149 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 TSC1Q92574 1164 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 NXPE2Q96DL1 559 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 KLHL11Q9NVR0 708 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 DKK4Q9UBT3 224 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 HPCAL4Q9UM19 191 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 DAAM1Q9Y4D1 1078 aa20.81■□□□□ 0.92
TOP3A-219ENST00000584887 ADAMTS20P59510 1910 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 LGALS16A8MUM7 142 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 NEMP1O14524 444 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 CDK11BP21127 795 aaKnown RBP20.8■□□□□ 0.92
TOP3A-219ENST00000584887 GPD1P21695 349 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 L1CAMP32004 1257 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 GKP32189 559 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 HDAC4P56524 1084 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 RPS21P63220 83 aaKnown RBP20.8■□□□□ 0.92
TOP3A-219ENST00000584887 DAB2P98082 770 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 MYL5Q02045 173 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 NRG1Q02297 640 aaPredicted RBP20.8■□□□□ 0.92
TOP3A-219ENST00000584887 UBXN1Q04323 297 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 CLEC16AQ2KHT3 1053 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 TMEM259Q4ZIN3 620 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 CLEC17AQ6ZS10 378 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 ARHGEF2Q92974 986 aaKnown RBP20.8■□□□□ 0.92
TOP3A-219ENST00000584887 FEM1CQ96JP0 617 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 DCBLD2Q96PD2 775 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 GBP4Q96PP9 640 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 OSBPL2Q9H1P3 480 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 CAAP1Q9H8G2 361 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 ANO10Q9NW15 660 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 TMEM248Q9NWD8 314 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 UCKL1Q9NWZ5 548 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 ASPMQ8IZT6 3477 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 ZFHX4Q86UP3 3567 aa20.8■□□□□ 0.92
TOP3A-219ENST00000584887 FREM2Q5SZK8 3169 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 A6NNZ2 444 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 KRIT1O00522 736 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 RAMP2O60895 175 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 CALB1P05937 261 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 UNGP13051 313 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-219ENST00000584887 DGKAP23743 735 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 RFC1P35251 1148 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-219ENST00000584887 GEMIN4P57678 1058 aaKnown RBP20.79■□□□□ 0.92
TOP3A-219ENST00000584887 PTP4A2Q12974 167 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 TARDBPQ13148 414 aaKnown RBP eCLIP20.79■□□□□ 0.92
TOP3A-219ENST00000584887 POLD3Q15054 466 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-219ENST00000584887 STX1AQ16623 288 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 ZNF542PQ5EBM4 170 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 KIAA1161Q6NSJ0 714 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 SCYL2Q6P3W7 929 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 Q6ZSR6 202 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 PDZD3Q86UT5 571 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 NLRP14Q86W24 1093 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 SLC25A45Q8N413 288 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 SLC17A9Q9BYT1 436 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 DNAJC28Q9NX36 388 aa20.79■□□□□ 0.92
TOP3A-219ENST00000584887 FADS3Q9Y5Q0 445 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms