RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 ARHGAP20Q9P2F6 1191 aa13.41□□□□□ -0.26
ERBB2-220ENST00000584684 CNOT8Q9UFF9 292 aaKnown RBP13.41□□□□□ -0.26
ERBB2-220ENST00000584684 HPCAL4Q9UM19 191 aa13.41□□□□□ -0.26
ERBB2-220ENST00000584684 COL5A1P20908 1838 aaPredicted RBP13.41□□□□□ -0.26
ERBB2-220ENST00000584684 AKAP13Q12802 2813 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 PLK4O00444 970 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 KDELR3O43731 214 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 BNIP3LO60238 219 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 SH3BP5O60239 455 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 GYPCP04921 128 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 SERPING1P05155 500 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 TPM3P06753 285 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 CD38P28907 300 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 CCT8P50990 548 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 CCNHP51946 323 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-220ENST00000584684 C21orf59P57076 290 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 SIM1P81133 766 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-220ENST00000584684 OVGP1Q12889 678 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 ACAP1Q15027 740 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 POM121L1PQ3SYA9 428 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 SETMARQ53H47 684 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-220ENST00000584684 TDRD12Q587J7 1177 aaKnown RBP13.4□□□□□ -0.26
ERBB2-220ENST00000584684 SLC45A4Q5BKX6 768 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 CARD16Q5EG05 197 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 KCNT1Q5JUK3 1230 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 LAYNQ6UX15 382 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 CYP4V2Q6ZWL3 525 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-220ENST00000584684 ERN2Q76MJ5 926 aaKnown RBP13.4□□□□□ -0.26
ERBB2-220ENST00000584684 VPS36Q86VN1 386 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 ZSCAN30Q86W11 494 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 ARFGAP1Q8N6T3 406 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 ARRDC3Q96B67 414 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 SERAC1Q96JX3 654 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 HEPHQ9BQS7 1158 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 DYRK4Q9NR20 520 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 PCOLCE2Q9UKZ9 415 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
ERBB2-220ENST00000584684 FCF1Q9Y324 198 aaKnown RBP13.4□□□□□ -0.26
ERBB2-220ENST00000584684 YKT6O15498 198 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 AP1G1O43747 822 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 CREB3O43889 395 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 RNGTTO60942 597 aaKnown RBP13.39□□□□□ -0.27
ERBB2-220ENST00000584684 LRCH4O75427 683 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 LEFTY1O75610 366 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 RNF8O76064 485 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 TRIM16O95361 564 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 WNT1P04628 370 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 SKILP12757 684 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 HNRNPH3P31942 346 aaKnown RBP13.39□□□□□ -0.27
ERBB2-220ENST00000584684 PCK1P35558 622 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 NEK3P51956 506 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 TPI1P60174 286 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 SERINC3Q13530 473 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 INO80DQ53TQ3 878 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-220ENST00000584684 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 ERMARDQ5T6L9 678 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 PRPF39Q86UA1 669 aaKnown RBP13.39□□□□□ -0.27
ERBB2-220ENST00000584684 MFSD2AQ8NA29 543 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 TMEM145Q8NBT3 493 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 OR2AP1Q8NGE2 309 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 VOPP1Q96AW1 172 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 PEBP4Q96S96 227 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 SNRNP25Q9BV90 132 aaKnown RBP13.39□□□□□ -0.27
ERBB2-220ENST00000584684 OSBPL1AQ9BXW6 950 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 TRIM7Q9C029 511 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 ERVMER34-1Q9H9K5 563 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 AASDHPPTQ9NRN7 309 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 IFNKQ9P0W0 207 aa13.39□□□□□ -0.27
ERBB2-220ENST00000584684 LUC7L2Q9Y383 392 aaKnown RBP13.39□□□□□ -0.27
ERBB2-220ENST00000584684 SPEGQ15772 3267 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 CACNA1BQ00975 2339 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 A0A1B0GTQ1 180 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 SPAARA0A1B0GVQ0 90 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 RASA4BC9J798 803 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 PRAMEF26H0Y7S4 382 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 H0Y8X5 98 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 RNF103O00237 685 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 RASA4O43374 803 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 PRPSAP2O60256 369 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 TMCC1O94876 653 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 ADRB3P13945 408 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 MIPP30301 263 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 GRK6P43250 576 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 HCAR3P49019 387 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 NDST2P52849 883 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 NXPH1P58417 271 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 SNRPD1P62314 119 aaKnown RBP13.38□□□□□ -0.27
ERBB2-220ENST00000584684 FAM193AP78312 1265 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 SUZ12Q15022 739 aaKnown RBP13.38□□□□□ -0.27
ERBB2-220ENST00000584684 TRIP6Q15654 476 aaKnown RBP13.38□□□□□ -0.27
ERBB2-220ENST00000584684 ZNF284Q2VY69 593 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 INAVAQ3KP66 663 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 TMEM259Q4ZIN3 620 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 HORMAD1Q86X24 394 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 OXR1Q8N573 874 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 NIPA2Q8N8Q9 360 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 RAB7BQ96AH8 199 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 HMCESQ96FZ2 354 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 GDAP1L1Q96MZ0 367 aa13.38□□□□□ -0.27
ERBB2-220ENST00000584684 CNTNAP3BQ96NU0 1288 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms