RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 NEU3Q9UQ49 428 aa13.89□□□□□ -0.19
CDK5RAP3-233ENST00000584186 DMTF1Q9Y222 760 aa13.89□□□□□ -0.19
CDK5RAP3-233ENST00000584186 CA5BQ9Y2D0 317 aa13.89□□□□□ -0.19
CDK5RAP3-233ENST00000584186 WASF2Q9Y6W5 498 aa13.89□□□□□ -0.19
CDK5RAP3-233ENST00000584186 MAP1BP46821 2468 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 A0A1W2PQC6 194 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KRIT1O00522 736 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 BUB1O43683 1085 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KRT37O76014 449 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 CD160O95971 181 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ITGAVP06756 1048 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 PROS1P07225 676 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 SKILP12757 684 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 PSMA2P25787 234 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 L1CAMP32004 1257 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 GKP32189 559 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 NUDT1P36639 197 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ARRB1P49407 418 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 GEMIN4P57678 1058 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 NXPH1P58417 271 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 OGDHQ02218 1023 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KLHL30Q0D2K2 578 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 MAMLD1Q13495 774 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 IQCB1Q15051 598 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 INAVAQ3KP66 663 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 FBXL19Q6PCT2 694 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ZNF571Q7Z3V5 609 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 RAB44Q7Z6P3 723 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 GLRX5Q86SX6 157 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 LUZP1Q86V48 1076 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 MFSD2AQ8NA29 543 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 BAHD1Q8TBE0 780 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 EPAS1Q99814 870 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 SYT11Q9BT88 431 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 HDAC8Q9BY41 377 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 RETREG1Q9H6L5 497 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 PARVAQ9NVD7 372 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 FZD10Q9ULW2 581 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 DOCK4Q8N1I0 1966 aa13.88□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KNL1Q8NG31 2342 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 FREM2Q5SZK8 3169 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 PRAMEF26H0Y7S4 382 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KDELR3O43731 214 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 FTLP02792 175 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ITGB7P26010 798 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 NEK3P51956 506 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 MAPK8IP2Q13387 824 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 E4F1Q66K89 784 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 SEL1L3Q68CR1 1132 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 HORMAD1Q86X24 394 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 RTL3Q8N8U3 475 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 NETO2Q8NC67 525 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ADAMTS14Q8WXS8 1223 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 VCPIP1Q96JH7 1222 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 CATSPERBQ9H7T0 1116 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 CBX8Q9HC52 389 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 FZD3Q9NPG1 666 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 GPATCH2LQ9NWQ4 482 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 AIPL1Q9NZN9 384 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 FTSJ1Q9UET6 329 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 MSRB2Q9Y3D2 182 aa13.87□□□□□ -0.19
CDK5RAP3-233ENST00000584186 TNFSF14O43557 240 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 MAGEC1O60732 1142 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ADRB3P13945 408 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 AIF1P55008 147 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 TPI1P60174 286 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 SNRPD1P62314 119 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 NR1I3Q14994 352 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 SHBQ15464 509 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ZNF284Q2VY69 593 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ATXN7L2Q5T6C5 722 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 NEK5Q6P3R8 708 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 SPATS2Q86XZ4 545 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 SAP25Q8TEE9 199 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 GATA6Q92908 595 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ISG20Q96AZ6 181 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ZNF653Q96CK0 615 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 HMCESQ96FZ2 354 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KLHDC7BQ96G42 594 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KLC2Q9H0B6 622 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 NOL6Q9H6R4 1146 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 MYO1AQ9UBC5 1043 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 CNOT8Q9UFF9 292 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 PCSK1NQ9UHG2 260 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
CDK5RAP3-233ENST00000584186 KMT2BQ9UMN6 2715 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 RASA4BC9J798 803 aa13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 GOLGA6L19H0YKK7 550 aa13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 DDX3XO00571 662 aaKnown RBP eCLIP13.85□□□□□ -0.191e-8■■■□□ 15.4
CDK5RAP3-233ENST00000584186 NEMP1O14524 444 aa13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 YKT6O15498 198 aa13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 RASA4O43374 803 aa13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 SDC3O75056 442 aa13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 TMCC1O94876 653 aa13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 GSRP00390 522 aa13.85□□□□□ -0.19
CDK5RAP3-233ENST00000584186 UGT2B4P06133 528 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms