RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 HEPHQ9BQS7 1158 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 SNRNP25Q9BV90 132 aaKnown RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 NOL6Q9H6R4 1146 aaKnown RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 EBF2Q9HAK2 575 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 DONSONQ9NYP3 566 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 HECAQ9UBI9 543 aaPredicted RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 WASH4PA8MWX3 477 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 EIF3CLB5ME19 914 aaKnown RBP20.8■□□□□ 0.92
SS18-224ENST00000584083 RASA4BC9J798 803 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 EEF2KO00418 725 aaKnown RBP20.8■□□□□ 0.92
SS18-224ENST00000584083 DAPK3O43293 454 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 RASA4O43374 803 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 CA9Q16790 459 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 PARP15Q460N3 678 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 PIP5KL1Q5T9C9 394 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 SKA1Q96BD8 255 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 HMCESQ96FZ2 354 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 EIF3CQ99613 913 aaKnown RBP20.8■□□□□ 0.92
SS18-224ENST00000584083 THAP2Q9H0W7 228 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 ZDHHC6Q9H6R6 413 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 FNDC3AQ9Y2H6 1198 aaKnown RBP20.8■□□□□ 0.92
SS18-224ENST00000584083 WASF2Q9Y6W5 498 aa20.8■□□□□ 0.92
SS18-224ENST00000584083 RNF103O00237 685 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 KCNK3O14649 394 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 VILLO15195 856 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 SH3BP5O60239 455 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 LRCH4O75427 683 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 TAS2R38P59533 333 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 SNRPD1P62314 119 aaKnown RBP20.79■□□□□ 0.92
SS18-224ENST00000584083 PPP6R3Q5H9R7 873 aaPredicted RBP20.79■□□□□ 0.92
SS18-224ENST00000584083 CCDC122Q5T0U0 273 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 SPECC1LQ69YQ0 1117 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 ALKBH5Q6P6C2 394 aaKnown RBP20.79■□□□□ 0.92
SS18-224ENST00000584083 ERN2Q76MJ5 926 aaKnown RBP20.79■□□□□ 0.92
SS18-224ENST00000584083 UMODL1-AS1Q8N2C9 162 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 OR6K2Q8NGY2 324 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 KLC2Q9H0B6 622 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 PREBQ9HCU5 417 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 TM7SF3Q9NS93 570 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 ARHGAP20Q9P2F6 1191 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 CABIN1Q9Y6J0 2220 aa20.79■□□□□ 0.92
SS18-224ENST00000584083 C10orf142B7Z368 130 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 LATO43561 262 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 RNGTTO60942 597 aaKnown RBP20.78■□□□□ 0.92
SS18-224ENST00000584083 TPM1P09493 284 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 ZNF883P0CG24 379 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 CD38P28907 300 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 EIF4A3P38919 411 aaKnown RBP20.78■□□□□ 0.92
SS18-224ENST00000584083 SERINC3Q13530 473 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 TRIM14Q14142 442 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 ACAP1Q15027 740 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 SLC45A4Q5BKX6 768 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 KCNT1Q5JUK3 1230 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 TRIM69Q86WT6 500 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 PSTKQ8IV42 348 aaKnown RBP20.78■□□□□ 0.92
SS18-224ENST00000584083 NAXDQ8IW45 347 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 PLPP6Q8IY26 295 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 SETD7Q8WTS6 366 aaKnown RBP20.78■□□□□ 0.92
SS18-224ENST00000584083 CAMK1GQ96NX5 476 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 KCTD15Q96SI1 283 aaPredicted RBP20.78■□□□□ 0.92
SS18-224ENST00000584083 HDAC8Q9BY41 377 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 PCDHB9Q9Y5E1 797 aa20.78■□□□□ 0.92
SS18-224ENST00000584083 SPAARA0A1B0GVQ0 90 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 KRIT1O00522 736 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 WNT9AO14904 365 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 TMCC1O94876 653 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 PCDH8O95206 1070 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 GSRP00390 522 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 GKP32189 559 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 PCK1P35558 622 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 NUDT1P36639 197 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 CTSKP43235 329 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 NEK3P51956 506 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 NDST2P52849 883 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 PIGHQ14442 188 aaPredicted RBP20.77■□□□□ 0.92
SS18-224ENST00000584083 TSR1Q2NL82 804 aaKnown RBP20.77■□□□□ 0.92
SS18-224ENST00000584083 SETMARQ53H47 684 aaPredicted RBP20.77■□□□□ 0.92
SS18-224ENST00000584083 NAPEPLDQ6IQ20 393 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 FBXL19Q6PCT2 694 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 CYP4V2Q6ZWL3 525 aaPredicted RBP20.77■□□□□ 0.92
SS18-224ENST00000584083 OR2AP1Q8NGE2 309 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 OR8K1Q8NGG5 319 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 CASKIN2Q8WXE0 1202 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 NUP85Q9BW27 656 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 ZNHIT6Q9NWK9 470 aaKnown RBP20.77■□□□□ 0.92
SS18-224ENST00000584083 ANAPC7Q9UJX3 599 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 DMTF1Q9Y222 760 aa20.77■□□□□ 0.92
SS18-224ENST00000584083 TRPM6Q9BX84 2022 aa20.77■□□□□ 0.91
SS18-224ENST00000584083 A0A1W2PQU0 124 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 H0Y8X5 98 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 POP4O95707 220 aaKnown RBP20.76■□□□□ 0.91
SS18-224ENST00000584083 WNT1P04628 370 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 CYP1A2P05177 515 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 ITGB7P26010 798 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 HNRNPH3P31942 346 aaKnown RBP20.76■□□□□ 0.91
SS18-224ENST00000584083 SIM1P81133 766 aaPredicted RBP20.76■□□□□ 0.91
SS18-224ENST00000584083 HNRNPDQ14103 355 aaKnown RBP20.76■□□□□ 0.91
SS18-224ENST00000584083 MYLK3Q32MK0 819 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 INO80DQ53TQ3 878 aaPredicted RBP20.76■□□□□ 0.91
SS18-224ENST00000584083 ATXN7L2Q5T6C5 722 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms