RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.97■□□□□ 0.953e-6■□□□□ 10.5
SRSF1-206ENST00000583741 FAM204AQ9H8W3 233 aa20.97■□□□□ 0.95
SRSF1-206ENST00000583741 SPTLC3Q9NUV7 552 aa20.97■□□□□ 0.95
SRSF1-206ENST00000583741 UCKL1Q9NWZ5 548 aa20.97■□□□□ 0.95
SRSF1-206ENST00000583741 COX16Q9P0S2 106 aa20.97■□□□□ 0.95
SRSF1-206ENST00000583741 PCDHB1Q9Y5F3 818 aa20.97■□□□□ 0.95
SRSF1-206ENST00000583741 EIF3CLB5ME19 914 aaKnown RBP20.96■□□□□ 0.95
SRSF1-206ENST00000583741 PRAMEF26H0Y7S4 382 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 MCF2LO15068 1137 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 IPO7O95373 1038 aaKnown RBP20.96■□□□□ 0.95
SRSF1-206ENST00000583741 PRLRP16471 622 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 GNA15P30679 374 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 GGCXP38435 758 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 ZNF211Q13398 564 aaPredicted RBP20.96■□□□□ 0.95
SRSF1-206ENST00000583741 DLG2Q15700 870 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 TBC1D25Q3MII6 688 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 PCSK4Q6UW60 755 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 SPACA3Q8IXA5 215 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 KIAA1524Q8TCG1 905 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 ZNF606Q8WXB4 792 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 KLHDC7BQ96G42 594 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 RPRD1AQ96P16 312 aaPredicted RBP20.96■□□□□ 0.95
SRSF1-206ENST00000583741 EIF3CQ99613 913 aaKnown RBP20.96■□□□□ 0.95
SRSF1-206ENST00000583741 FEM1AQ9BSK4 669 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 SYT11Q9BT88 431 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 DDIT4Q9NX09 232 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 SLC25A13Q9UJS0 675 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 OR51B4Q9Y5P0 310 aa20.96■□□□□ 0.95
SRSF1-206ENST00000583741 C1QTNF3-AMACRE9PGA6 284 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 MT-CO3P00414 261 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 DGKAP23743 735 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 MSNP26038 577 aaKnown RBP20.95■□□□□ 0.94
SRSF1-206ENST00000583741 ACTN2P35609 894 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 CDR2Q01850 454 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 PDCLQ13371 301 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 SLC18A3Q16572 532 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 PIP5KL1Q5T9C9 394 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 GPR155Q7Z3F1 870 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 ZNF677Q86XU0 584 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 SH2D3CQ8N5H7 860 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 KLK6Q92876 244 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 SLC12A6Q9UHW9 1150 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 VANGL2Q9ULK5 521 aa20.95■□□□□ 0.94
SRSF1-206ENST00000583741 A0A087X0T9 212 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 ALOX15BO15296 676 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 BNIP3LO60238 219 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 RNGTTO60942 597 aaKnown RBP20.94■□□□□ 0.94
SRSF1-206ENST00000583741 LCA5LO95447 670 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 CTSLP07711 333 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 CCDC175P0C221 793 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 FAM228BP0C875 321 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 THEGLP0DJG4 465 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 TNFAIP3P21580 790 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 CCR1P32246 355 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 AUHQ13825 339 aaKnown RBP20.94■□□□□ 0.94
SRSF1-206ENST00000583741 SPA17Q15506 151 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 TAF3Q5VWG9 929 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 DEFB106AQ8N104 65 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 ZNF843Q8N446 348 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 LSM14AQ8ND56 463 aaKnown RBP20.94■□□□□ 0.94
SRSF1-206ENST00000583741 ACRBPQ8NEB7 543 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 OR4C6Q8NH72 309 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 SLC2A13Q96QE2 648 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 PREBQ9HCU5 417 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 FZD3Q9NPG1 666 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 SEPT11Q9NVA2 429 aaKnown RBP20.94■□□□□ 0.94
SRSF1-206ENST00000583741 VPS28Q9UK41 221 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 ADGRG1Q9Y653 693 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 TEX51A0A1B0GUA7 166 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 SLC31A1O15431 190 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 FFAR2O15552 330 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 THAP12O43422 761 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 MED7O43513 233 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 GIMD1P0DJR0 217 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 SLC2A3P11169 496 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 OXCT1P55809 520 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 KRT83P78385 493 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 DAB2P98082 770 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 RNF34Q969K3 372 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 PPP2R2CQ9Y2T4 447 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 HS3ST4Q9Y661 456 aa20.94■□□□□ 0.94
SRSF1-206ENST00000583741 A0A1W2PQU0 124 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 RNF103O00237 685 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 DDX3XO00571 662 aaKnown RBP eCLIP20.93■□□□□ 0.943e-29■■□□□ 14.3
SRSF1-206ENST00000583741 GRAP2O75791 330 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 MT-CO1P00395 513 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 MMEP08473 750 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 PLA2G2AP14555 144 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 CHRNB2P17787 502 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 CXADRP78310 365 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 E2F1Q01094 437 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 FMO1Q01740 532 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 OR13H1Q8NG92 308 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 CPXM1Q96SM3 734 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 KLHL11Q9NVR0 708 aa20.93■□□□□ 0.94
SRSF1-206ENST00000583741 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.92■□□□□ 0.94
SRSF1-206ENST00000583741 ZSCAN12O43309 604 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 SRCP12931 536 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 MYF5P13349 255 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 ZNF177Q13360 481 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms