RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 RFX8Q6ZV50 586 aa25.38■■□□□ 1.65
TSEN54-209ENST00000583454 RAB44Q7Z6P3 723 aaPredicted RBP25.38■■□□□ 1.65
TSEN54-209ENST00000583454 UMODL1-AS1Q8N2C9 162 aa25.38■■□□□ 1.65
TSEN54-209ENST00000583454 SH2D3CQ8N5H7 860 aa25.38■■□□□ 1.65
TSEN54-209ENST00000583454 ARHGEF2Q92974 986 aaKnown RBP25.38■■□□□ 1.65
TSEN54-209ENST00000583454 SPON2Q9BUD6 331 aa25.38■■□□□ 1.65
TSEN54-209ENST00000583454 DONSONQ9NYP3 566 aa25.38■■□□□ 1.65
TSEN54-209ENST00000583454 CWC15Q9P013 229 aaKnown RBP25.38■■□□□ 1.65
TSEN54-209ENST00000583454 TMEM8BA6NDV4 472 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 RAMP2O60895 175 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 SIN3BO75182 1162 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 MT-CO1P00395 513 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 GOT1P17174 413 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 GLDCP23378 1020 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 ACVRL1P37023 503 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 HADHBP55084 474 aaKnown RBP25.37■■□□□ 1.65
TSEN54-209ENST00000583454 SLC20A2Q08357 652 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 HNRNPDQ14103 355 aaKnown RBP25.37■■□□□ 1.65
TSEN54-209ENST00000583454 HADHQ16836 314 aaKnown RBP25.37■■□□□ 1.65
TSEN54-209ENST00000583454 SMTNL2Q2TAL5 461 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 CHCHD4Q8N4Q1 142 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 FAM71BQ8TC56 605 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 PTPRN2Q92932 1015 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 ATP13A1Q9HD20 1204 aa25.37■■□□□ 1.65
TSEN54-209ENST00000583454 LUC7LQ9NQ29 371 aaKnown RBP25.37■■□□□ 1.65
TSEN54-209ENST00000583454 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.37■■□□□ 1.65
TSEN54-209ENST00000583454 GOLGA6L6A8MZA4 724 aa25.36■■□□□ 1.65
TSEN54-209ENST00000583454 TRIM16O95361 564 aa25.36■■□□□ 1.65
TSEN54-209ENST00000583454 SRCP12931 536 aa25.36■■□□□ 1.65
TSEN54-209ENST00000583454 YBEYP58557 167 aaPredicted RBP25.36■■□□□ 1.65
TSEN54-209ENST00000583454 DPYSQ14117 519 aa25.36■■□□□ 1.65
TSEN54-209ENST00000583454 MESDQ14696 234 aa25.36■■□□□ 1.65
TSEN54-209ENST00000583454 POLD3Q15054 466 aaPredicted RBP25.36■■□□□ 1.65
TSEN54-209ENST00000583454 TRIP6Q15654 476 aaKnown RBP25.36■■□□□ 1.65
TSEN54-209ENST00000583454 DLG2Q15700 870 aa25.36■■□□□ 1.65
TSEN54-209ENST00000583454 POLNQ7Z5Q5 900 aa25.36■■□□□ 1.65
TSEN54-209ENST00000583454 HSPH1Q92598 858 aa25.36■■□□□ 1.65
TSEN54-209ENST00000583454 RSPH9Q9H1X1 276 aaPredicted RBP25.36■■□□□ 1.65
TSEN54-209ENST00000583454 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.36■■□□□ 1.65
TSEN54-209ENST00000583454 FNDC3AQ9Y2H6 1198 aaKnown RBP25.36■■□□□ 1.65
TSEN54-209ENST00000583454 REXO2Q9Y3B8 237 aaKnown RBP25.36■■□□□ 1.65
TSEN54-209ENST00000583454 CBX4O00257 560 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 ZNF883P0CG24 379 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 CLCN6P51797 869 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 TAS2R40P59535 323 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 ARF5P84085 180 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 ZBTB16Q05516 673 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 ZNF423Q2M1K9 1284 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 RETSATQ6NUM9 610 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 TSC1Q92574 1164 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 FAM129BQ96TA1 746 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 ORAI3Q9BRQ5 295 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 KLC2Q9H0B6 622 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 PCDH18Q9HCL0 1135 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 RALYQ9UKM9 306 aaKnown RBP25.35■■□□□ 1.65
TSEN54-209ENST00000583454 PCOLCE2Q9UKZ9 415 aa25.35■■□□□ 1.65
TSEN54-209ENST00000583454 A0A0A6YYK5 440 aaPredicted RBP25.34■■□□□ 1.65
TSEN54-209ENST00000583454 TMEM110-MUSTN1A8MSY1 372 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 H3BRJ5 948 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 DAPK3O43293 454 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 KDELR3O43731 214 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 ERCC2P18074 760 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 SSR1P43307 286 aaKnown RBP25.34■■□□□ 1.65
TSEN54-209ENST00000583454 ARSEP51690 589 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 GSDMDP57764 484 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 PARP15Q460N3 678 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 LINGO4Q6UY18 593 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 DBX2Q6ZNG2 339 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 BAHD1Q8TBE0 780 aaPredicted RBP25.34■■□□□ 1.65
TSEN54-209ENST00000583454 GAREM1Q9H706 876 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 LRRC19Q9H756 370 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 GRPEL1Q9HAV7 217 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 TFR2Q9UP52 801 aa25.34■■□□□ 1.65
TSEN54-209ENST00000583454 A0A1B0GVT2 93 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 RASA4BC9J798 803 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 K7ERQ8 282 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 RASA4O43374 803 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 SMAD6O43541 496 aaKnown RBP25.33■■□□□ 1.65
TSEN54-209ENST00000583454 IPO7O95373 1038 aaKnown RBP25.33■■□□□ 1.65
TSEN54-209ENST00000583454 SEMA4FO95754 770 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 CD160O95971 181 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 CAPNS1P04632 268 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 KRT7P08729 469 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 FTH1P19P0C7X4 201 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 VAV1P15498 845 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 ARL4AP40617 200 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 NDST2P52849 883 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 HLA-BQ31612 363 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 ATP13A4Q4VNC1 1196 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 AFMIDQ63HM1 303 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 GLRX5Q86SX6 157 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 ATP11CQ8NB49 1132 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 BIRC7Q96CA5 298 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 CSPG4P5Q96PW8 444 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 RCOR3Q9P2K3 495 aaPredicted RBP25.33■■□□□ 1.65
TSEN54-209ENST00000583454 CELSR3Q9NYQ7 3312 aa25.33■■□□□ 1.65
TSEN54-209ENST00000583454 RCCD1A6NED2 376 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 C10orf142B7Z368 130 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 CER1O95813 267 aa25.32■■□□□ 1.64
TSEN54-209ENST00000583454 IL4RP24394 825 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms