RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 PCK1P35558 622 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 GRIA4P48058 902 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 ZNF135P52742 658 aaPredicted RBP11.1□□□□□ -0.63
NDEL1-208ENST00000580237 ADKP55263 362 aaKnown RBP11.1□□□□□ -0.63
NDEL1-208ENST00000580237 C21orf59P57076 290 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 RHOAP61586 193 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 SNRPD1P62314 119 aaKnown RBP11.1□□□□□ -0.63
NDEL1-208ENST00000580237 KRT81Q14533 505 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 SLC18A3Q16572 532 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 CA9Q16790 459 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 HADHQ16836 314 aaKnown RBP11.1□□□□□ -0.63
NDEL1-208ENST00000580237 CARD16Q5EG05 197 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 KCNT1Q5JUK3 1230 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 ZFYVE27Q5T4F4 411 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 ARTNQ5T4W7 220 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 AGBL4Q5VU57 503 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 IL27RAQ6UWB1 636 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 LAYNQ6UX15 382 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 PSTKQ8IV42 348 aaKnown RBP11.1□□□□□ -0.63
NDEL1-208ENST00000580237 PAF1Q8N7H5 531 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 TMIEQ8NEW7 156 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 OR2I1PQ8NGU4 316 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 OR6K2Q8NGY2 324 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 SKA1Q96BD8 255 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 ARHGEF26Q96DR7 871 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 CELF6Q96J87 481 aaKnown RBP11.1□□□□□ -0.63
NDEL1-208ENST00000580237 BTBD6Q96KE9 485 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 CCDC42Q96M95 316 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 SLC6A18Q96N87 628 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 HEPHQ9BQS7 1158 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 SLC32A1Q9H598 525 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 TM9SF3Q9HD45 589 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 HECAQ9UBI9 543 aaPredicted RBP11.1□□□□□ -0.63
NDEL1-208ENST00000580237 UBA2Q9UBT2 640 aaPredicted RBP11.1□□□□□ -0.63
NDEL1-208ENST00000580237 ACTL7AQ9Y615 435 aa11.1□□□□□ -0.63
NDEL1-208ENST00000580237 A0A1B0GVT2 93 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 A0A1W2PPC4 97 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 TMEM110-MUSTN1A8MSY1 372 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 WASH4PA8MWX3 477 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 AKR1B15C9JRZ8 316 aaPredicted RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 DFFAO00273 331 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 CDX4O14627 284 aaPredicted RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 PCDH8O95206 1070 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 GSRP00390 522 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 IGHV4-34P06331 123 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 H2AFZP0C0S5 128 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 ITGB7P26010 798 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 MAT2AP31153 395 aaKnown RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 CSNK1EP49674 416 aaKnown RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 CCR5P51681 352 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 NEK3P51956 506 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 NDST2P52849 883 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 PPP2CBP62714 309 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 PPP2CAP67775 309 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 RAD51Q06609 339 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 SETMARQ53H47 684 aaPredicted RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 SLC45A4Q5BKX6 768 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 ATXN7L2Q5T6C5 722 aaPredicted RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 PSAPL1Q6NUJ1 521 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 FBXL19Q6PCT2 694 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 SARM1Q6SZW1 724 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 H2AFVQ71UI9 128 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 ERN2Q76MJ5 926 aaKnown RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 PRPF39Q86UA1 669 aaKnown RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 UMODL1-AS1Q8N2C9 162 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 ARFGAP1Q8N6T3 406 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 NIPA2Q8N8Q9 360 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 OR2AP1Q8NGE2 309 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 CASKIN2Q8WXE0 1202 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 ISG20Q96AZ6 181 aaKnown RBP11.09□□□□□ -0.63
NDEL1-208ENST00000580237 SERAC1Q96JX3 654 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 PREBQ9HCU5 417 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 UVRAGQ9P2Y5 699 aa11.09□□□□□ -0.63
NDEL1-208ENST00000580237 TDRD6O60522 2096 aaKnown RBP11.08□□□□□ -0.63
NDEL1-208ENST00000580237 PCNX2A6NKB5 2137 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 MED19A0JLT2 244 aaPredicted RBP11.08□□□□□ -0.64
NDEL1-208ENST00000580237 NEMP1O14524 444 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 UGT2B4P06133 528 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 ERCC2P18074 760 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 RACK1P63244 317 aaKnown RBP11.08□□□□□ -0.64
NDEL1-208ENST00000580237 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
NDEL1-208ENST00000580237 SERINC3Q13530 473 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 DPYSL2Q16555 572 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 BOLA3Q53S33 107 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 CFAP58Q5T655 872 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 PIP5KL1Q5T9C9 394 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 NAPEPLDQ6IQ20 393 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 TMCO3Q6UWJ1 677 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 CYP4V2Q6ZWL3 525 aaPredicted RBP11.08□□□□□ -0.64
NDEL1-208ENST00000580237 DEFB124Q8NES8 71 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 TEKT4Q8WW24 435 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 ARRDC3Q96B67 414 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 EXOC2Q96KP1 924 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 OSBPL1AQ9BXW6 950 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 PACSIN1Q9BY11 444 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 NOL6Q9H6R4 1146 aaKnown RBP11.08□□□□□ -0.64
NDEL1-208ENST00000580237 GAREM1Q9H706 876 aa11.08□□□□□ -0.64
NDEL1-208ENST00000580237 OSGEPQ9NPF4 335 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms