RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	CACNA2D3	Q8IZS8	1091 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	ZNF276	Q8N554	614 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	ZNF557	Q8N988	423 aa	Predicted RBP	6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	SYT2	Q8N9I0	419 aa	Predicted RBP	6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	TMEM145	Q8NBT3	493 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	OR13H1	Q8NG92	308 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	LMX1A	Q8TE12	382 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	BTN2A2	Q8WVV5	523 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	KIAA1143	Q96AT1	154 aa	Predicted RBP	6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	TMA16	Q96EY4	203 aa	Known RBP	6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	SLC45A3	Q96JT2	553 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	CGRRF1	Q99675	332 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	MRPL45	Q9BRJ2	306 aa	Known RBP	6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	FAM213A	Q9BRX8	229 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	BOC	Q9BWV1	1114 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	MTMR12	Q9C0I1	747 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	SPAST	Q9UBP0	616 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	RASAL2	Q9UJF2	1139 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	ODF2L	Q9ULJ1	636 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	KCTD3	Q9Y597	815 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	STYXL1	Q9Y6J8	313 aa		6.18	□□□□□ -1.42
KPNB1-209	ENST00000580158	NF1	P21359	2839 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158		A0A1W2PQH9	124 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158		A6NNZ2	444 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	TCP11X1	B4DZS4	312 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	NKX2-8	O15522	239 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	JAK2	O60674	1132 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	IGLV1-40	P01703	118 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	RPLP0	P05388	317 aa	Known RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	ANXA6	P08133	673 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	NME1	P15531	152 aa	Known RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	HNRNPA2B1	P22626	353 aa	Known RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	HOXD9	P28356	352 aa	Predicted RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	NNMT	P40261	264 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	ETV5	P41161	510 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	RECQL	P46063	649 aa	Predicted RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	SERPINB4	P48594	390 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	PGF	P49763	221 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	TNNC1	P63316	161 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	CCL7	P80098	99 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	GTF2B	Q00403	316 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	CCDC15	Q0P6D6	951 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	MRPL49	Q13405	166 aa	Known RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	C9orf64	Q5T6V5	341 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	FAM46C	Q5VWP2	391 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	RNF219	Q5W0B1	726 aa	Predicted RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158		Q6ZSR6	202 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	TMPRSS9	Q7Z410	1059 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	GDF7	Q7Z4P5	450 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	PTAR1	Q7Z6K3	402 aa	Predicted RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	PARG	Q86W56	976 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	BRSK2	Q8IWQ3	736 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	SLC35F3	Q8IY50	421 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	DIS3L2	Q8IYB7	885 aa	Known RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	AGGF1	Q8N302	714 aa	eCLIP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	KDM1B	Q8NB78	822 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	OR6C4	Q8NGE1	309 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	CXorf38	Q8TB03	319 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	NOC3L	Q8WTT2	800 aa	Known RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	TCTN2	Q96GX1	697 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	TNIP3	Q96KP6	325 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	LURAP1	Q96LR2	239 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	CPEB1	Q9BZB8	566 aa	Known RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	LRRN3	Q9H3W5	708 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	DPEP3	Q9H4B8	488 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	ZHX3	Q9H4I2	956 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	GPN2	Q9H9Y4	310 aa	Predicted RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	PARVG	Q9HBI0	331 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	LATS2	Q9NRM7	1088 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	OSER1	Q9NX31	292 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	RBAK	Q9NYW8	714 aa	Predicted RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	GULP1	Q9UBP9	304 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	SIX4	Q9UIU6	781 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	STRIP2	Q9ULQ0	834 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	SCML2	Q9UQR0	700 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	PDZD2	O15018	2839 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	APC	P25054	2843 aa		6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	6.17	□□□□□ -1.42
KPNB1-209	ENST00000580158	RTTN	Q86VV8	2226 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	TISP43	B9A030	160 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	CASC3	O15234	703 aa	Known RBP	6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	CDC45	O75419	566 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	MOCS3	O95396	460 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	NADK	O95544	446 aa	Predicted RBP	6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	KRT18	P05783	430 aa	Known RBP	6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	SRPRA	P08240	638 aa	Known RBP	6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	SLFN14	P0C7P3	912 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	PLA2G4B	P0C869	781 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	DRD2	P14416	443 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	TRIM21	P19474	475 aa	Known RBP	6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	TCN2	P20062	427 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	PDC	P20941	246 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	MZF1	P28698	734 aa	Predicted RBP	6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	DRD3	P35462	400 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	UGT1A3	P35503	534 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	SCNN1A	P37088	669 aa		6.16	□□□□□ -1.42
KPNB1-209	ENST00000580158	MAP3K7CL	P57077	242 aa		6.16	□□□□□ -1.42

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