RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CLCN1P35523 988 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 TMPRSS3P57727 454 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 CLDN2P57739 230 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 PTPN20Q4JDL3 420 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 TMEM259Q4ZIN3 620 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 FAM102AQ5T9C2 384 aaPredicted RBP18.26■□□□□ 0.51
MKS1-209ENST00000580127 ZCCHC8Q6NZY4 707 aaKnown RBP18.26■□□□□ 0.51
MKS1-209ENST00000580127 DPY19L3Q6ZPD9 716 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 SLC47A2Q86VL8 602 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 CHST14Q8NCH0 376 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 BTN2A2Q8WVV5 523 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 RAB7BQ96AH8 199 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 ARHGEF26Q96DR7 871 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 CCDC97Q96F63 343 aaPredicted RBP18.26■□□□□ 0.51
MKS1-209ENST00000580127 DPH1Q9BZG8 443 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 ZYG11BQ9C0D3 744 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 TNKS2Q9H2K2 1166 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 FZD3Q9NPG1 666 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 THSD1Q9NS62 852 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 MPP6Q9NZW5 540 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 KIAA1468Q9P260 1216 aa18.26■□□□□ 0.51
MKS1-209ENST00000580127 IGLV3-10A0A075B6K4 115 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 A0A0D9SEW6 157 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 SPTY2D1-AS1A0A0U1RR47 76 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 K7ESM1 405 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 CSO75390 466 aaKnown RBP18.25■□□□□ 0.51
MKS1-209ENST00000580127 DXOO77932 396 aaKnown RBP18.25■□□□□ 0.51
MKS1-209ENST00000580127 ADRB3P13945 408 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 RBMS1P29558 406 aaKnown RBP18.25■□□□□ 0.51
MKS1-209ENST00000580127 GABRB2P47870 512 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 RPIAP49247 311 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 SERPINH1P50454 418 aaKnown RBP18.25■□□□□ 0.51
MKS1-209ENST00000580127 GABREP78334 506 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 RHDQ02161 417 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 PTK2BQ14289 1009 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 ARL13BQ3SXY8 428 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 TAF1BQ53T94 588 aaPredicted RBP18.25■□□□□ 0.51
MKS1-209ENST00000580127 CDCP2Q5VXM1 449 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 SEL1L3Q68CR1 1132 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 KYAT3Q6YP21 454 aaKnown RBP18.25■□□□□ 0.51
MKS1-209ENST00000580127 PARGQ86W56 976 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 PLPP6Q8IY26 295 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 FAM71AQ8IYT1 594 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 MLKLQ8NB16 471 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 IL12RB2Q99665 862 aa18.25■□□□□ 0.51
MKS1-209ENST00000580127 ZFR2Q9UPR6 939 aaKnown RBP18.25■□□□□ 0.51
MKS1-209ENST00000580127 HELZ2Q9BYK8 2649 aaKnown RBP18.24■□□□□ 0.51
MKS1-209ENST00000580127 ERVH48-1M5A8F1 160 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 CSF2P04141 144 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 PRB1P04280 392 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 MPOP05164 745 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 GNA12Q03113 381 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 POLD3Q15054 466 aaPredicted RBP18.24■□□□□ 0.51
MKS1-209ENST00000580127 MAN2A1Q16706 1144 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 GCNT7Q6ZNI0 430 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 ZNF683Q8IZ20 524 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 RYBPQ8N488 228 aaPredicted RBP18.24■□□□□ 0.51
MKS1-209ENST00000580127 KCNE4Q8WWG9 221 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 ISG20Q96AZ6 181 aaKnown RBP18.24■□□□□ 0.51
MKS1-209ENST00000580127 WBP1Q96G27 269 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 BMFQ96LC9 184 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 LENG8Q96PV6 779 aaPredicted RBP18.24■□□□□ 0.51
MKS1-209ENST00000580127 TBCBQ99426 244 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 HECAQ9UBI9 543 aaPredicted RBP18.24■□□□□ 0.51
MKS1-209ENST00000580127 SALL4Q9UJQ4 1053 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 BPTFQ12830 3046 aa18.24■□□□□ 0.51
MKS1-209ENST00000580127 CPED1A4D0V7 1026 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 TPP1O14773 563 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 LSM8O95777 96 aaKnown RBP18.23■□□□□ 0.51
MKS1-209ENST00000580127 NME1P15531 152 aaKnown RBP18.23■□□□□ 0.51
MKS1-209ENST00000580127 CDH5P33151 784 aaPredicted RBP18.23■□□□□ 0.51
MKS1-209ENST00000580127 THOP1P52888 689 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 APBA1Q02410 837 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 RAPGEF1Q13905 1077 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 ZNF542PQ5EBM4 170 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 OR7D4Q8NG98 312 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 WDR48Q8TAF3 677 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 IFI44Q8TCB0 444 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 ASB12Q8WXK4 309 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 NAF1Q96HR8 494 aaKnown RBP18.23■□□□□ 0.51
MKS1-209ENST00000580127 C1QTNF7Q9BXJ2 289 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 C1QTNF2Q9BXJ5 285 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 PLCB1Q9NQ66 1216 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 PPARGC1AQ9UBK2 798 aaKnown RBP18.23■□□□□ 0.51
MKS1-209ENST00000580127 SPASTQ9UBP0 616 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 PCDHB1Q9Y5F3 818 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 FADS3Q9Y5Q0 445 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 WASF2Q9Y6W5 498 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 LOC400499M0QZD8 3231 aa18.23■□□□□ 0.51
MKS1-209ENST00000580127 DOCK4Q8N1I0 1966 aa18.22■□□□□ 0.51
MKS1-209ENST00000580127 POM121BA6NF01 834 aa18.22■□□□□ 0.51
MKS1-209ENST00000580127 AQP9O43315 295 aa18.22■□□□□ 0.51
MKS1-209ENST00000580127 POP4O95707 220 aaKnown RBP18.22■□□□□ 0.51
MKS1-209ENST00000580127 JUNDP17535 347 aa18.22■□□□□ 0.51
MKS1-209ENST00000580127 CCNHP51946 323 aaPredicted RBP18.22■□□□□ 0.51
MKS1-209ENST00000580127 SNRPD1P62314 119 aaKnown RBP18.22■□□□□ 0.51
MKS1-209ENST00000580127 CFHR1Q03591 330 aa18.22■□□□□ 0.51
MKS1-209ENST00000580127 RAD51Q06609 339 aa18.22■□□□□ 0.51
MKS1-209ENST00000580127 PDE1CQ14123 709 aaPredicted RBP18.22■□□□□ 0.51
MKS1-209ENST00000580127 FZD2Q14332 565 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms