RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 PABPC1P11940 636 aaKnown RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 MMP8P22894 467 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 BLVRAP53004 296 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 RAB10P61026 200 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 SLC34A1Q06495 639 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 POTEHQ6S545 545 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 ZCCHC23Q6ZST2 131 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 TRAPPC5Q8IUR0 188 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 C12orf29Q8N999 325 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 PIWIL2Q8TC59 973 aaKnown RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 SEMA4DQ92854 862 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 MRPL57Q9BQC6 102 aaKnown RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 PCDH18Q9HCL0 1135 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 SMIM28A0A1B0GU29 152 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 FTH1P02794 183 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 TXNDC11Q6PKC3 985 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 C11orf74Q86VG3 221 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 SYT12Q8IV01 421 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 RASGEF1CQ8N431 466 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 ZNF655Q8N720 491 aaPredicted RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 DLG3Q92796 817 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 IGFLR1Q9H665 355 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 DHX33Q9H6R0 707 aaKnown RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 TMEM216Q9P0N5 145 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 CNOT3O75175 753 aaKnown RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 LAG3P18627 525 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 NOL9Q5SY16 702 aaKnown RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 DOK6Q6PKX4 331 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 FNIP1Q8TF40 1166 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 PDZD7Q9H5P4 517 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 USE1Q9NZ43 259 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 PCDHGC3Q9UN70 934 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 FAM50BQ9Y247 325 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 IGLV3-22A0A075B6J6 115 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 TMEM88BA6NKF7 163 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 LDLRP01130 860 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 GNRH1P01148 92 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 CCDC166P0CW27 439 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 SELPP16109 830 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 RPS7P62081 194 aaKnown RBP15.36■□□□□ 0.05
ITGB4-206ENST00000579662 NCF4Q15080 339 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 TRIP4Q15650 581 aaPredicted RBP15.36■□□□□ 0.05
ITGB4-206ENST00000579662 ZNF544Q6NX49 715 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 ELMO1Q92556 727 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 FBXO6Q9NRD1 293 aaPredicted RBP15.36■□□□□ 0.05
ITGB4-206ENST00000579662 CLDN5O00501 218 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 TLR5O60602 858 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 DUSP11O75319 330 aaKnown RBP15.36■□□□□ 0.05
ITGB4-206ENST00000579662 SQLEQ14534 574 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 GRM3Q14832 879 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 RD3Q7Z3Z2 195 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 FAXDC2Q96IV6 333 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 BBS4Q96RK4 519 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 ALOX15BO15296 676 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 ATP6V0D1P61421 351 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 FAM187BQ17R55 369 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 XYLT1Q86Y38 959 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 BSNDQ8WZ55 320 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 C12orf42Q96LP6 360 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 FBXO10Q9UK96 956 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 AGO1Q9UL18 857 aaKnown RBP15.36■□□□□ 0.05
ITGB4-206ENST00000579662 AFDNP55196 1824 aaKnown RBP15.36■□□□□ 0.05
ITGB4-206ENST00000579662 LCA5LO95447 670 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 CYP20A1Q6UW02 462 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 NECAB2Q7Z6G3 386 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 CLEC4DQ8WXI8 215 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 OMDQ99983 421 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 SEMA4BQ9NPR2 832 aaPredicted RBP15.36■□□□□ 0.05
ITGB4-206ENST00000579662 ATAD3AQ9NVI7 634 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 LTN1O94822 1766 aa15.36■□□□□ 0.05
ITGB4-206ENST00000579662 DCXO43602 365 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 TSPAN1O60635 241 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 GUCA1AP43080 201 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 CDK18Q07002 472 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SLC24A5Q71RS6 500 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SLC27A5Q9Y2P5 690 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 AKAP12Q02952 1782 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 A0A0U1RQJ8 604 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SGTAO43765 313 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 LPOP22079 712 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 POU1F1P28069 291 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SMAD3P84022 425 aaKnown RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PFKFB4Q16877 469 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SHROOM1Q2M3G4 852 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SH3BP5LQ7L8J4 393 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 IRF2BP1Q8IU81 584 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PTGR2Q8N8N7 351 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SETD9Q8NE22 299 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 GRIN3AQ8TCU5 1115 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 A0A0G2JLL6 359 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 MEI4A8MW99 385 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 CD3EAPO15446 510 aaKnown RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 KCNH1O95259 989 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 SHBGP04278 402 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 GSTM1P09488 218 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 TNNI3P19429 210 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 ABL2P42684 1182 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 GLUD2P49448 558 aa15.35■□□□□ 0.05
ITGB4-206ENST00000579662 PURAQ00577 322 aaKnown RBP15.35■□□□□ 0.05
ITGB4-206ENST00000579662 GNA13Q14344 377 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms