RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CCINQ13939 588 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 POLD3Q15054 466 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 PRKD1Q15139 912 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 AAK1Q2M2I8 961 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 GLE1Q53GS7 698 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 SLC45A4Q5BKX6 768 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 C1orf228Q6PIY5 440 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 NPNTQ6UXI9 565 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 TPGS1Q6ZTW0 290 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 SYDE1Q6ZW31 735 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 TFAP2DQ7Z6R9 452 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 KIAA0907Q7Z7F0 614 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 CCDC117Q8IWD4 279 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 YAF2Q8IY57 180 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.18□□□□□ -1.1
COPS3-215ENST00000578317 MAFAQ8NHW3 353 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 CCDC26Q8TAB7 109 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 TFB1MQ8WVM0 346 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 C1orf54Q8WWF1 131 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ARHGEF2Q92974 986 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 RTP4Q96DX8 246 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ZNF837Q96EG3 531 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 ALG14Q96F25 216 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ASIC4Q96FT7 647 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 RPP25Q9BUL9 199 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 BBS2Q9BXC9 721 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 SLC39A8Q9C0K1 460 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ECT2Q9H8V3 914 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 PRKAG3Q9UGI9 489 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 SLC27A6Q9Y2P4 619 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 MFHAS1Q9Y4C4 1052 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 NUMBLQ9Y6R0 609 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 A0A1W2PP55 124 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 C5orf60A6NFR6 353 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 EFCAB8A8MWE9 144 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 LOC730098B7Z3J9 87 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 RASA4BC9J798 803 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 H0Y626 953 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 RASA4O43374 803 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 CACNG3O60359 315 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 MAFKO60675 156 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 CYP17A1P05093 508 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 EIF2DP41214 584 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 PAPOLAP51003 745 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 GNA12Q03113 381 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 TNK2Q07912 1038 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 SLC20A2Q08357 652 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 SERINC3Q13530 473 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 CDH18Q13634 790 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 DHX34Q14147 1143 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 DMC1Q14565 340 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 FSCBQ5H9T9 825 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 TTC27Q6P3X3 843 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 CCDC137Q6PK04 289 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 CIR1Q86X95 450 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 SLC44A3Q8N4M1 653 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 OR13H1Q8NG92 308 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 OR52K2Q8NGK3 314 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 GRK7Q8WTQ7 553 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ATG4AQ8WYN0 398 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ACDQ96AP0 544 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ZNF599Q96NL3 588 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 XPO6Q96QU8 1125 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 FERMT1Q9BQL6 677 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 FEM1AQ9BSK4 669 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 DDX47Q9H0S4 455 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 KCNK12Q9HB15 430 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 HPS4Q9NQG7 708 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 IPO11Q9UI26 975 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 ZNF148Q9UQR1 794 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 NEU2Q9Y3R4 380 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 A0A0C4DFX4 3053 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ANAPC1Q9H1A4 1944 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 DOCK6Q96HP0 2047 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 MUC3AQ02505 3323 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 A0A0A0MRY4 1105 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 A0A0D9SEW6 157 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 ZSCAN5CA6NGD5 496 aaPredicted RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 OTOL1A6NHN0 477 aaPredicted RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 NEDD8-MDP1E9PL57 170 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 MATN3O15232 486 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 KDELR3O43731 214 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 GCATO75600 419 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 PEX11BO96011 259 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 RHOCP08134 193 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 CISD3P0C7P0 127 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 ADH5P11766 374 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 ARSAP15289 507 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 HLA-FP30511 346 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 GDI1P31150 447 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 KCNJ1P48048 391 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 DRG2P55039 364 aaKnown RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 IL10RBQ08334 325 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 HNRNPDQ14103 355 aaKnown RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 RFTN1Q14699 578 aaPredicted RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 GAB4Q2WGN9 574 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 ANO4Q32M45 955 aa8.17□□□□□ -1.1
COPS3-215ENST00000578317 PREPLQ4J6C6 727 aaPredicted RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 INO80DQ53TQ3 878 aaPredicted RBP8.17□□□□□ -1.1
COPS3-215ENST00000578317 TRIM68Q6AZZ1 485 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms