RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 ADAM22Q9P0K1 906 aa14.79□□□□□ -0.04
SMARCE1-213ENST00000578044 NEU3Q9UQ49 428 aa14.79□□□□□ -0.04
SMARCE1-213ENST00000578044 WASF2Q9Y6W5 498 aa14.79□□□□□ -0.04
SMARCE1-213ENST00000578044 TDRD6O60522 2096 aaKnown RBP14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 WASH4PA8MWX3 477 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 K7ERQ8 282 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 CBX4O00257 560 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 KPNA3O00505 521 aaPredicted RBP14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 KCNK3O14649 394 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 EPHB6O15197 1021 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 SRGAP2O75044 1071 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 GSRP00390 522 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 RRM1P23921 792 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 AKT2P31751 481 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 SUOXP51687 545 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 ZNF143P52747 638 aaPredicted RBP14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 YBEYP58557 167 aaPredicted RBP14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 RPS21P63220 83 aaKnown RBP14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 ATP11AP98196 1134 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 MON1BQ7L1V2 547 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 OR7D4Q8NG98 312 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 ARHGEF2Q92974 986 aaKnown RBP14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 BPIFA3Q9BQP9 254 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 NLRC4Q9NPP4 1024 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 HPCAL4Q9UM19 191 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 MFHAS1Q9Y4C4 1052 aa14.78□□□□□ -0.04
SMARCE1-213ENST00000578044 ASXL3Q9C0F0 2248 aa14.77□□□□□ -0.04
SMARCE1-213ENST00000578044 ADAMTS20P59510 1910 aa14.77□□□□□ -0.04
SMARCE1-213ENST00000578044 MYLKQ15746 1914 aa14.77□□□□□ -0.04
SMARCE1-213ENST00000578044 A0A1W2PQU0 124 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 TAF4O00268 1085 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 TOR1BO14657 336 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 TSPAN6O43657 245 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 LEFTY1O75610 366 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 RFPL3O75679 317 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 LRIG2O94898 1065 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 POP4O95707 220 aaKnown RBP14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 CD160O95971 181 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 PLEKP08567 350 aaPredicted RBP14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 FERP16591 822 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 CKMT2P17540 419 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 ACP1P24666 158 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 RFC1P35251 1148 aaPredicted RBP14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 HNF1BP35680 557 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 ACADVLP49748 655 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 ZNF211Q13398 564 aaPredicted RBP14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 NCAPHQ15003 741 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 C2CD6Q53TS8 623 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 EMC1Q8N766 993 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 DENND6BQ8NEG7 585 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 HCAR2Q8TDS4 363 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 ARRDC3Q96B67 414 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 TBC1D31Q96DN5 1066 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 FEM1CQ96JP0 617 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 CNDP2Q96KP4 475 aaKnown RBP14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 C11orf70Q9BRQ4 267 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 CNPY3Q9BT09 278 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 NAT10Q9H0A0 1025 aaKnown RBP14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 HSD3B7Q9H2F3 369 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 USP29Q9HBJ7 922 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 TMPRSS4Q9NRS4 437 aa14.77□□□□□ -0.05
SMARCE1-213ENST00000578044 FASNP49327 2511 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 ANKRD62A6NC57 917 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 KDELR3O43731 214 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 RAMP2O60895 175 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 ADRB3P13945 408 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 DESP17661 470 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 GPD1P21695 349 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 CCNHP51946 323 aaPredicted RBP14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 ZNF135P52742 658 aaPredicted RBP14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 SNRPD1P62314 119 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 E2F1Q01094 437 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 UBXN1Q04323 297 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 POLD3Q15054 466 aaPredicted RBP14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 PARP15Q460N3 678 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 ZNF805Q5CZA5 627 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 ARSIQ5FYB1 569 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 PPP1R15BQ5SWA1 713 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 CCDC183Q5T5S1 534 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 WDR59Q6PJI9 974 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 KYAT3Q6YP21 454 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 SLFN11Q7Z7L1 901 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 UMODL1-AS1Q8N2C9 162 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 RTL3Q8N8U3 475 aaKnown RBP14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 CHST14Q8NCH0 376 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 OR2AP1Q8NGE2 309 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 OR4C6Q8NH72 309 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 FAM172AQ8WUF8 416 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 TBATAQ96M53 351 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 PCDHB18PQ96TA0 734 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 SYT11Q9BT88 431 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 SPON2Q9BUD6 331 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 SELENOOQ9BVL4 669 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 C1QTNF2Q9BXJ5 285 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 NRSN2Q9GZP1 204 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 DKK3Q9UBP4 350 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 FADS3Q9Y5Q0 445 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 SNX10Q9Y5X0 201 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 IGSF10Q6WRI0 2623 aa14.76□□□□□ -0.05
SMARCE1-213ENST00000578044 A6NNZ2 444 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms