RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SLC45A4Q5BKX6 768 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 C6orf118Q5T5N4 469 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 CXorf57Q6NSI4 855 aaKnown RBP16.38■□□□□ 0.21
VAPA-204ENST00000577901 SETD3Q86TU7 594 aaPredicted RBP16.38■□□□□ 0.21
VAPA-204ENST00000577901 ZNF683Q8IZ20 524 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 NTAN1Q96AB6 310 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 NXPE2Q96DL1 559 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 DCBLD2Q96PD2 775 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 ZYG11BQ9C0D3 744 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 MYO1AQ9UBC5 1043 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 PPARGC1AQ9UBK2 798 aaKnown RBP16.38■□□□□ 0.21
VAPA-204ENST00000577901 OR12D3Q9UGF7 316 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D30Q9Y2I9 924 aa16.38■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3DA0A087WVF3 549 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3IA0A087WXS9 549 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3EA0A087X179 549 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3KA0A087X1G2 549 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3FA6NER0 549 aaPredicted RBP16.37■□□□□ 0.21
VAPA-204ENST00000577901 TMEM191CA6NGB0 347 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3LB9A6J9 549 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 ATMINO43313 823 aaPredicted RBP16.37■□□□□ 0.21
VAPA-204ENST00000577901 CNTN5O94779 1100 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 RHOCP08134 193 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3HP0C7X1 549 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 VAV1P15498 845 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 PSMA2P25787 234 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 EPHA8P29322 1005 aaPredicted RBP16.37■□□□□ 0.21
VAPA-204ENST00000577901 IRAK1P51617 712 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 AIF1P55008 147 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 NRG1Q02297 640 aaPredicted RBP16.37■□□□□ 0.21
VAPA-204ENST00000577901 RAB6CQ53S08 254 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 ALFQ53S48 1182 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3GQ6DHY5 549 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3CQ6IPX1 549 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.37■□□□□ 0.21
VAPA-204ENST00000577901 TMC6Q7Z403 805 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 DNAAF5Q86Y56 855 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 TBC1D3Q8IZP1 549 aaPredicted RBP16.37■□□□□ 0.21
VAPA-204ENST00000577901 TSC1Q92574 1164 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 FEM1AQ9BSK4 669 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 RAB6CQ9H0N0 254 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 MUC3BQ9H195 1237 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 RETREG1Q9H6L5 497 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 ERVMER34-1Q9H9K5 563 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 MPP6Q9NZW5 540 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 ARHGAP20Q9P2F6 1191 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 ACACAQ13085 2346 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 BPTFQ12830 3046 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 CABIN1Q9Y6J0 2220 aa16.37■□□□□ 0.21
VAPA-204ENST00000577901 KNL1Q8NG31 2342 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 A0A087X0T9 212 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 LATO43561 262 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 RNF8O76064 485 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 FAM228BP0C875 321 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 OR1E1P30953 314 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 DRD3P35462 400 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 ABCG1P45844 678 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 RXRGP48443 463 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 NUMBP49757 651 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 PPP2CBP62714 309 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 PPP2CAP67775 309 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 KRT83P78385 493 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 BNIP3Q12983 259 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 TARDBPQ13148 414 aaKnown RBP eCLIP16.36■□□□□ 0.211e-10■■■■□ 23.3
VAPA-204ENST00000577901 EFHC2Q5JST6 749 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 CCDC122Q5T0U0 273 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 NAPEPLDQ6IQ20 393 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 ALKBH5Q6P6C2 394 aaKnown RBP16.36■□□□□ 0.21
VAPA-204ENST00000577901 OXR1Q8N573 874 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 CCDC185Q8N715 623 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 MFSD2AQ8NA29 543 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 FNIP1Q8TF40 1166 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 DNAJC7Q99615 494 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 NCAPGQ9BPX3 1015 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 RBSNQ9H1K0 784 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 DEF6Q9H4E7 631 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 SLC25A13Q9UJS0 675 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 VPS28Q9UK41 221 aa16.36■□□□□ 0.21
VAPA-204ENST00000577901 GCN1Q92616 2671 aaKnown RBP16.36■□□□□ 0.21
VAPA-204ENST00000577901 TP53BP1Q12888 1972 aaPredicted RBP16.35■□□□□ 0.21
VAPA-204ENST00000577901 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
VAPA-204ENST00000577901 METAP1P53582 386 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 OGDHQ02218 1023 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 SEMG2Q02383 582 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 HES3Q5TGS1 186 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 RWDD4Q6NW29 188 aaKnown RBP16.35■□□□□ 0.21
VAPA-204ENST00000577901 FBXL19Q6PCT2 694 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 ZNF783Q6ZMS7 281 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 TFAP2DQ7Z6R9 452 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 PRPF39Q86UA1 669 aaKnown RBP16.35■□□□□ 0.21
VAPA-204ENST00000577901 SPATS2Q86XZ4 545 aaKnown RBP16.35■□□□□ 0.21
VAPA-204ENST00000577901 CNGA4Q8IV77 575 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 PIP4K2CQ8TBX8 421 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 FRS2Q8WU20 508 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 FAM131CQ96AQ9 280 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 ALG14Q96F25 216 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 ANP32EQ9BTT0 268 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 C2orf49Q9BVC5 232 aaPredicted RBP16.35■□□□□ 0.21
VAPA-204ENST00000577901 KDM4CQ9H3R0 1056 aa16.35■□□□□ 0.21
VAPA-204ENST00000577901 ABHD10Q9NUJ1 306 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms