RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 ADA2Q9NZK5 511 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 GMIPQ9P107 970 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 NFKBIL1Q9UBC1 381 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CYP8B1Q9UNU6 501 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 MAPRE3Q9UPY8 281 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 RIPK3Q9Y572 518 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 KCNE2Q9Y6J6 123 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 QRICH2Q9H0J4 1663 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ADGRA3Q8IWK6 1321 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 RNF103-CHMP3A0A140T963 221 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 EDDM13A0A1B0GTR0 161 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TCRBV21S2A2A0A5A6 115 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM150BA6NC51 233 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 H0Y858 1186 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 DGKIO75912 1065 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 DCTN3O75935 186 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 UBXN7O94888 489 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CPSF4O95639 269 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CER1O95813 267 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM253P0C7T8 217 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TPBGLP0DKB5 382 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 IL10P22301 178 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 UGT1A1P22309 533 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ME2P23368 584 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 RRM2P31350 389 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 RANBP1P43487 201 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CASP4P49662 377 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 NEK2P51955 445 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 YBEYP58557 167 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SNTA1Q13424 505 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 BMPR2Q13873 1038 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 DMC1Q14565 340 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TRIP4Q15650 581 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 GRIK5Q16478 980 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 HECTD2Q5U5R9 776 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 LYSMD4Q5XG99 296 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 EEF1DP3Q658K8 133 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 KRT80Q6KB66 452 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 C17orf99Q6UX52 265 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 VN1R5Q7Z5H4 357 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 RPAINQ86UA6 219 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 PEX5LQ8IYB4 626 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 PRSS58Q8IYP2 241 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 EMC1Q8N766 993 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 C12orf76Q8N812 135 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM71DQ8N9W8 422 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 COLGALT1Q8NBJ5 622 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF461Q8TAF7 563 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC35G2Q8TBE7 412 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 BAP1Q92560 729 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 KLK6Q92876 244 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 NXPE3Q969Y0 559 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC22A18Q96BI1 424 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ZNF333Q96JL9 665 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 LMLNQ96KR4 655 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TOX2Q96NM4 488 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TMEM209Q96SK2 561 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SEMA3CQ99985 751 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 DUSP16Q9BY84 665 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 ING2Q9H160 280 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM83DQ9H4H8 585 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 RAD21L1Q9H4I0 556 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 CARS2Q9HA77 564 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 PARVBQ9HBI1 364 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 USP29Q9HBJ7 922 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 LMBRD1Q9NUN5 540 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 PRKAG3Q9UGI9 489 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 TUBGCP4Q9UGJ1 667 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 MKL2Q9ULH7 1088 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SIT1Q9Y3P8 196 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 SNX8Q9Y5X2 465 aa2.97□□□□□ -1.93
SMCHD1-203ENST00000577880 FRMPD4Q14CM0 1322 aa2.96□□□□□ -1.93
SMCHD1-203ENST00000577880 SSU72P8A0A1W2PR75 194 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TNFRSF10AO00220 468 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ENPP3O14638 875 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ATP9AO75110 1047 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 APBB3O95704 486 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CYP1A1P04798 512 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GLI1P08151 1106 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GSTM1P09488 218 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GZMAP12544 262 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TACR2P21452 398 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 NOS3P29474 1203 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CCKBRP32239 447 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ABL2P42684 1182 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MAGEA10P43363 369 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GJA8P48165 433 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SERPINH1P50454 418 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 GCNT1Q02742 428 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 C1QBPQ07021 282 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 MAD2L1Q13257 205 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SEC23AQ15436 765 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 TEAD2Q15562 447 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC18A3Q16572 532 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 BEND6Q5SZJ8 279 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 KLHDC7AQ5VTJ3 777 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 ABHD15Q6UXT9 468 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CHSY3Q70JA7 882 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 DET1Q7L5Y6 550 aa2.96□□□□□ -1.94
SMCHD1-203ENST00000577880 CHST15Q7LFX5 561 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms