RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 PPP1R16AQ96I34 528 aa14.42□□□□□ -0.1
PPP4R1-206ENST00000577779 FEM1CQ96JP0 617 aa14.42□□□□□ -0.1
PPP4R1-206ENST00000577779 BTN2A3PQ96KV6 586 aa14.42□□□□□ -0.1
PPP4R1-206ENST00000577779 FEM1AQ9BSK4 669 aa14.42□□□□□ -0.1
PPP4R1-206ENST00000577779 SIRPGQ9P1W8 387 aa14.42□□□□□ -0.1
PPP4R1-206ENST00000577779 VPS28Q9UK41 221 aa14.42□□□□□ -0.1
PPP4R1-206ENST00000577779 DOLKQ9UPQ8 538 aa14.42□□□□□ -0.1
PPP4R1-206ENST00000577779 CELSR1Q9NYQ6 3014 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 RNF103O00237 685 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 O00370 1275 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 MAPK13O15264 365 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 FYNP06241 537 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 PDIA4P13667 645 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 TSHRP16473 764 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 CD97P48960 835 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 ATP1A2P50993 1020 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 THOP1P52888 689 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 PTK2BQ14289 1009 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 ZC3H12AQ5D1E8 599 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 RABGAP1LQ5R372 815 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 TMEM164Q5U3C3 297 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 KRT39Q6A163 491 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 PMF1Q6P1K2 205 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 TAC4Q86UU9 113 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 ATP11CQ8NB49 1132 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 KIAA0895Q8NCT3 520 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 GRIN3AQ8TCU5 1115 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 SCG3Q8WXD2 468 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 ALG14Q96F25 216 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 TBATAQ96M53 351 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 CMKLR1Q99788 373 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 CLPBQ9H078 707 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 MIS12Q9H081 205 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 LRRN3Q9H3W5 708 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 NAALADL1Q9UQQ1 740 aa14.41□□□□□ -0.1
PPP4R1-206ENST00000577779 SDK2Q58EX2 2172 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 STMND1H3BQB6 276 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 MTSS1O43312 755 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 CALUO43852 315 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 FBXO21O94952 628 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 CD2BP2O95400 341 aaKnown RBP14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 VDRP11473 427 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 SRCP12931 536 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 CLCN6P51797 869 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 NEK3P51956 506 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 RIPPLY3P57055 190 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 PFN3P60673 137 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 STK38Q15208 465 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 ARSIQ5FYB1 569 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 FAXCQ5TGI0 409 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 CHST14Q8NCH0 376 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 FBXL13Q8NEE6 735 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 SLC35F5Q8WV83 523 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 EEF2KMTQ96G04 330 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 LENG8Q96PV6 779 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 KLF6Q99612 283 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 EXOC1Q9NV70 894 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 RAB20Q9NX57 234 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 PNMA8BQ9ULN7 279 aaPredicted RBP14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 HS3ST2Q9Y278 367 aa14.4□□□□□ -0.1
PPP4R1-206ENST00000577779 NF1P21359 2839 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 M0QYT0 321 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 POLR2DO15514 142 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 MT-CO1P00395 513 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 CELA2BP08218 269 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 ADRB3P13945 408 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 PDCP20941 246 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 GTF2H1P32780 548 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 CENPCQ03188 943 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 ZFP36L1Q07352 338 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 LCLAT1Q6UWP7 414 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 CCNJLQ8IV13 435 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 ATP6V0D2Q8N8Y2 350 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 Q8N9G6 341 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 OR52K2Q8NGK3 314 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 PCDH19Q8TAB3 1148 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 FAM149B1Q96BN6 582 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 CATSPER2Q96P56 530 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 PRMT1Q99873 361 aaKnown RBP14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 IL36AQ9UHA7 158 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 SLC12A6Q9UHW9 1150 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 FADS3Q9Y5Q0 445 aa14.39□□□□□ -0.11
PPP4R1-206ENST00000577779 IGLON5A6NGN9 336 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 KCNU1A8MYU2 1149 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 K7ERQ8 282 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 LEFTY1O75610 366 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 RRM1P23921 792 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 NR2F2P24468 414 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 NASPP49321 788 aaPredicted RBP14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 MXI1P50539 228 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 ENPEPQ07075 957 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 ELOCQ15369 112 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 TCEA2Q15560 299 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 PHF19Q5T6S3 580 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 FHL5Q5TD97 284 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 SYPL2Q5VXT5 272 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 ZSCAN30Q86W11 494 aa14.38□□□□□ -0.11
PPP4R1-206ENST00000577779 GRAMD1CQ8IYS0 662 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms