RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TIGD7Q6NT04 549 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NPNTQ6UXI9 565 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 METTL3Q86U44 580 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 C12orf40Q86WS4 652 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TP53INP2Q8IXH6 220 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PLPP6Q8IY26 295 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 AHI1Q8N157 1196 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 DCAF4L2Q8NA75 395 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TTC16Q8NEE8 873 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ST13P5Q8NFI4 369 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ATL2Q8NHH9 583 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CSGALNACT1Q8TDX6 532 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CASKIN2Q8WXE0 1202 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 EXOC4Q96A65 974 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HMCESQ96FZ2 354 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RUNDC3BQ96NL0 473 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PNKPQ96T60 521 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 VAT1Q99536 393 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 C2orf49Q9BVC5 232 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CHRDQ9H2X0 955 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ABCB8Q9NUT2 735 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 IPO11Q9UI26 975 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GGA2Q9UJY4 613 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NEUROG3Q9Y4Z2 214 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HEY1Q9Y5J3 304 aa11.36□□□□□ -0.59
CDK5RAP3-204ENST00000577664 LAMA1P25391 3075 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GOLGA6L10A0A0M3HER8 536 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CFAP69A5D8W1 941 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SPECC1L-ADORA2AF8WAN1 911 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MCF2LO15068 1137 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NPC1O15118 1278 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PHF2O75151 1096 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ASLP04424 464 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 C7P10643 843 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RBP3P10745 1247 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CD72P21854 359 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CTHP32929 405 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CD70P32970 193 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ACVRL1P37023 503 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 COILP38432 576 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CSKP41240 450 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GRIA2P42262 883 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NOVA1P51513 510 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GALK1P51570 392 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GEMIN4P57678 1058 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 EIF3EP60228 445 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 DYNLT1P63172 113 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TUBB4BP68371 445 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 IFI35P80217 286 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ENPP2Q13822 863 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TMEM196Q5HYL7 178 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 PITRM1Q5JRX3 1037 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 APCDD1Q8J025 514 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CEP112Q8N8E3 955 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TERB1Q8NA31 727 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MNS1Q8NEH6 495 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TFB1MQ8WVM0 346 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ISG20Q96AZ6 181 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HAUS1Q96CS2 278 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CELF6Q96J87 481 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CAPZA3Q96KX2 299 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 QKIQ96PU8 341 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 IL12RB2Q99665 862 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 DNAJC17Q9NVM6 304 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 DNPEPQ9ULA0 475 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HPCAL4Q9UM19 191 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HS3ST2Q9Y278 367 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MSRB2Q9Y3D2 182 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NEU2Q9Y3R4 380 aa11.35□□□□□ -0.59
CDK5RAP3-204ENST00000577664 C5orf60A6NFR6 353 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MAN2B1O00754 1011 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GIPC1O14908 333 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GCATO75600 419 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 SRPRAP08240 638 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HNRNPLP14866 589 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 DRD1P21728 446 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RENBPP51606 427 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CLCN6P51797 869 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ARF5P84085 180 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NSUN2Q08J23 767 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GEN1Q17RS7 908 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 FUT11Q495W5 492 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 TEX44Q53QW1 395 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 ALG1LQ6GMV1 187 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 GRAMD4Q6IC98 578 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 RETSATQ6NUM9 610 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 C4orf22Q6V702 233 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 KLHDC8BQ8IXV7 354 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 CCDC13Q8IYE1 715 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MMGT1Q8N4V1 131 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 FAM160A2Q8N612 972 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 NAT16Q8N8M0 369 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 OR7D4Q8NG98 312 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 C1orf54Q8WWF1 131 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 HTR3CQ8WXA8 447 aa11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 MAGOHBQ96A72 148 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-204ENST00000577664 LOXL4Q96JB6 756 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms