RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ASIC2Q16515 512 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 CARD16Q5EG05 197 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 LRRC73Q5JTD7 316 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 NAPEPLDQ6IQ20 393 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 DCUN1D2Q6PH85 259 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 PRPF39Q86UA1 669 aaKnown RBP12.12□□□□□ -0.47
LITAF-219ENST00000576334 TMIEQ8NEW7 156 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 NTAN1Q96AB6 310 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 PEBP4Q96S96 227 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 ELF4Q99607 663 aaPredicted RBP12.12□□□□□ -0.47
LITAF-219ENST00000576334 TTYH3Q9C0H2 523 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 ZDHHC6Q9H6R6 413 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 RALYQ9UKM9 306 aaKnown RBP12.12□□□□□ -0.47
LITAF-219ENST00000576334 PCDHGB2Q9Y5G2 931 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 TDRD6O60522 2096 aaKnown RBP12.11□□□□□ -0.47
LITAF-219ENST00000576334 FLRT2O43155 660 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 SLC7A4O43246 635 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 RAMP2O60895 175 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 SDC3O75056 442 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 PCDH8O95206 1070 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 PRNPP04156 253 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 ITIH2P19823 946 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 EPHB2P29323 1055 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 MAPKAPK2P49137 400 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 CLCN6P51797 869 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 SCAPQ12770 1279 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 FGL2Q14314 439 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
LITAF-219ENST00000576334 ZNF284Q2VY69 593 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 RETSATQ6NUM9 610 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 ZNF783Q6ZMS7 281 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 ERN2Q76MJ5 926 aaKnown RBP12.11□□□□□ -0.47
LITAF-219ENST00000576334 PARS2Q7L3T8 475 aaKnown RBP12.11□□□□□ -0.47
LITAF-219ENST00000576334 TMC6Q7Z403 805 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 GLRX5Q86SX6 157 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 TRIM69Q86WT6 500 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 ZNF354CQ86Y25 554 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 RYBPQ8N488 228 aaPredicted RBP12.11□□□□□ -0.47
LITAF-219ENST00000576334 ADAMTS14Q8WXS8 1223 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 HMCESQ96FZ2 354 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 CELF6Q96J87 481 aaKnown RBP12.11□□□□□ -0.47
LITAF-219ENST00000576334 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 HEPHQ9BQS7 1158 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 CNPY3Q9BT09 278 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 HECAQ9UBI9 543 aaPredicted RBP12.11□□□□□ -0.47
LITAF-219ENST00000576334 PCSK1NQ9UHG2 260 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 ZMIZ1Q9ULJ6 1067 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 ITM2BQ9Y287 266 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
LITAF-219ENST00000576334 NEUROG3Q9Y4Z2 214 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
LITAF-219ENST00000576334 FAM149AA5PLN7 773 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 KRIT1O00522 736 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 RAD51BO15315 384 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 INSIG1O15503 277 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 SPINT1O43278 529 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 KDELR3O43731 214 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 PCDHGA12O60330 932 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 SERPINC1P01008 464 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 FTLP02792 175 aaPredicted RBP12.1□□□□□ -0.47
LITAF-219ENST00000576334 TCF4P15884 667 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 PSMA2P25787 234 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 L1CAMP32004 1257 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 ABL2P42684 1182 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 RECQLP46063 649 aaPredicted RBP12.1□□□□□ -0.47
LITAF-219ENST00000576334 FANCCQ00597 558 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 DNAJC3Q13217 504 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 FILIP1LQ4L180 1135 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 ACBD5Q5T8D3 534 aaPredicted RBP12.1□□□□□ -0.47
LITAF-219ENST00000576334 SFMBT2Q5VUG0 894 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 PLEKHA7Q6IQ23 1121 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
LITAF-219ENST00000576334 TP53INP2Q8IXH6 220 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 EID2Q8N6I1 236 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 PCDH20Q8N6Y1 951 aaKnown RBP12.1□□□□□ -0.47
LITAF-219ENST00000576334 RTL3Q8N8U3 475 aaKnown RBP12.1□□□□□ -0.47
LITAF-219ENST00000576334 SAP25Q8TEE9 199 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 CPLX3Q8WVH0 158 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 EXOC2Q96KP1 924 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 HDAC8Q9BY41 377 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 MAGEH1Q9H213 219 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 PREBQ9HCU5 417 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 GDF3Q9NR23 364 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 AIPL1Q9NZN9 384 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 MYO1AQ9UBC5 1043 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 MSRB2Q9Y3D2 182 aa12.1□□□□□ -0.47
LITAF-219ENST00000576334 DSPP15924 2871 aaKnown RBP12.1□□□□□ -0.47
LITAF-219ENST00000576334 NBEAQ8NFP9 2946 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 ARID1BQ8NFD5 2236 aaPredicted RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 A0A1W2PQC6 194 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 TMEM191CA6NGB0 347 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 RASA4BC9J798 803 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 J3KR12 359 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 RASA4O43374 803 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 BUB1O43683 1085 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 TMCC1O94876 653 aa12.09□□□□□ -0.47
LITAF-219ENST00000576334 PAK4O96013 591 aaPredicted RBP12.09□□□□□ -0.47
LITAF-219ENST00000576334 UGT2B4P06133 528 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms