RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 IL36AQ9UHA7 158 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 PCDHB11Q9Y5F2 797 aa16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 USP9YO00507 2555 aaPredicted RBP16.63■□□□□ 0.25
CTDNEP1-211ENST00000575783 LMO7DNF2Z398 122 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 SART1O43290 800 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 SMAD6O43541 496 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 SNAP91O60641 907 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 EPB41P11171 864 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 NOS2P35228 1153 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 MCCD1P59942 119 aaPredicted RBP16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 KRT83P78385 493 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 CCL7P80098 99 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 KIF26BQ2KJY2 2108 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 KIAA1161Q6NSJ0 714 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 ZNF564Q8TBZ8 553 aaPredicted RBP16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 PPP1R16AQ96I34 528 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 SIRPGQ9P1W8 387 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 RABGEF1Q9UJ41 708 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 VANGL2Q9ULK5 521 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 HS3ST2Q9Y278 367 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 COQ4Q9Y3A0 265 aa16.62■□□□□ 0.25
CTDNEP1-211ENST00000575783 COL27A1Q8IZC6 1860 aaPredicted RBP16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 PRAMEF33A0A0G2JMD5 474 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 IGLON5A6NGN9 336 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 PRAMEF10O60809 474 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 LEFTY1O75610 366 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 RPLP0P05388 317 aaKnown RBP16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 ITIH1P19827 911 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 TBXAS1P24557 533 aaPredicted RBP16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 RECQLP46063 649 aaPredicted RBP16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 NEK3P51956 506 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 THOP1P52888 689 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 FOXK1P85037 733 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 AUHQ13825 339 aaKnown RBP16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 MORC3Q14149 939 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 STILQ15468 1287 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 FAXCQ5TGI0 409 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 LINGO4Q6UY18 593 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 BEND5Q7L4P6 421 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 PHACTR4Q8IZ21 702 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 SDR16C5Q8N3Y7 309 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 CCDC74AQ96AQ1 378 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 KLF6Q99612 283 aaPredicted RBP16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 FUCA2Q9BTY2 467 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 LRRC61Q9BV99 259 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 TRIM62Q9BVG3 475 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 CPEB1Q9BZB8 566 aaKnown RBP16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 SLC13A1Q9BZW2 595 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 CLPBQ9H078 707 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 FAM204AQ9H8W3 233 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 POPDC2Q9HBU9 364 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 DOLKQ9UPQ8 538 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 LOXL2Q9Y4K0 774 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 FADS3Q9Y5Q0 445 aa16.61■□□□□ 0.25
CTDNEP1-211ENST00000575783 D6RAR5 112 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 CETN3O15182 167 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 RHOBTB3O94955 611 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 IGLV3-25P01717 112 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 SLC2A3P11169 496 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 ADRB3P13945 408 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 TSHRP16473 764 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 CCR1P32246 355 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 GGCXP38435 758 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 YWHAZP63104 245 aaKnown RBP16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 TCEA2Q15560 299 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 DPY19L3Q6ZPD9 716 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 GUF1Q8N442 669 aaKnown RBP16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 JPH3Q8WXH2 748 aaPredicted RBP16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 TMEM74Q96NL1 305 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 LENG8Q96PV6 779 aaPredicted RBP16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 PSMG3-AS1Q96PY0 264 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 C2orf49Q9BVC5 232 aaPredicted RBP16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 SRRTQ9BXP5 876 aaKnown RBP16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 FOXJ2Q9P0K8 574 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 VPS51Q9UID3 782 aa16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 PNMA8BQ9ULN7 279 aaPredicted RBP16.6■□□□□ 0.25
CTDNEP1-211ENST00000575783 NYNRINQ9P2P1 1898 aaKnown RBP16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 A0A1B0GVL5 298 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 BLACEA4D250 179 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 NEMP1O14524 444 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 CLDN11O75508 207 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 MYL1P05976 194 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 CELA2BP08218 269 aaPredicted RBP16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 PRR29P0C7W0 189 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 GPD2P43304 727 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 ACADSBP45954 432 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 DNA2P51530 1060 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 MAPK10P53779 464 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 PFN3P60673 137 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 PTK2BQ14289 1009 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 NCAPHQ15003 741 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 TAF5Q15542 800 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 ZCWPW2Q504Y3 356 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 HIST2H2BCQ6DN03 193 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 FAM26EQ8N5C1 309 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 USP7Q93009 1102 aa16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 INTS4Q96HW7 963 aaKnown RBP16.59■□□□□ 0.25
CTDNEP1-211ENST00000575783 PSMB7Q99436 277 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms