RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	TRIM69	Q86WT6	500 aa		14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	SPATS2	Q86XZ4	545 aa	Known RBP	14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	VSTM4	Q8IW00	320 aa		14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	PCDH20	Q8N6Y1	951 aa	Known RBP	14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	PNPLA1	Q8N8W4	532 aa		14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	BAHD1	Q8TBE0	780 aa	Predicted RBP	14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	SETD7	Q8WTS6	366 aa	Known RBP	14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	ISG20	Q96AZ6	181 aa	Known RBP	14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	HMCES	Q96FZ2	354 aa		14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	HEPH	Q9BQS7	1158 aa		14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	SCNM1	Q9BWG6	230 aa		14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	MYO1A	Q9UBC5	1043 aa		14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	CAPN11	Q9UMQ6	739 aa		14.43	□□□□□ -0.1
EDC4-210	ENST00000575507	FARP1	Q9Y4F1	1045 aa	Predicted RBP	14.43	□□□□□ -0.1
EDC4-210	ENST00000575507		A0A1B0GTQ1	180 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507		A0A1W2PQJ5	194 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	RASA4B	C9J798	803 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	RASA4	O43374	803 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	GYPC	P04921	128 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	TCF4	P15884	667 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	PRLR	P16471	622 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	MIP	P30301	263 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	CDC25B	P30305	580 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	TRIM14	Q14142	442 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	ZNF284	Q2VY69	593 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	ERN2	Q76MJ5	926 aa	Known RBP	14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	ADAT2	Q7Z6V5	191 aa	Known RBP	14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	GATAD2A	Q86YP4	633 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	UMODL1-AS1	Q8N2C9	162 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	CHCHD4	Q8N4Q1	142 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	ZNF653	Q96CK0	615 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	KCTD15	Q96SI1	283 aa	Predicted RBP	14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	SNRNP25	Q9BV90	132 aa	Known RBP	14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	HDAC8	Q9BY41	377 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	TOR4A	Q9NXH8	423 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	HECA	Q9UBI9	543 aa	Predicted RBP	14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	AP4E1	Q9UPM8	1137 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	PCDHGB2	Q9Y5G2	931 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	SPTBN2	O15020	2390 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	PI4KA	P42356	2102 aa		14.42	□□□□□ -0.1
EDC4-210	ENST00000575507	ASCC3	Q8N3C0	2202 aa	Known RBP	14.41	□□□□□ -0.1
EDC4-210	ENST00000575507		A0A087X0T9	212 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	CXorf51A	A0A1B0GTR3	108 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507		A0A1W2PQU0	124 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	TLR4	O00206	839 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	SLC31A1	O15431	190 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	BUB1	O43683	1085 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	LRCH4	O75427	683 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	FAM228B	P0C875	321 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	IL1R2	P27930	398 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	ETFB	P38117	255 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	RECQL	P46063	649 aa	Predicted RBP	14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	AIF1	P55008	147 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	C21orf59	P57076	290 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	NXPH1	P58417	271 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	ZBED6	P86452	979 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	BNIP3	Q12983	259 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	SERINC3	Q13530	473 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	FGL2	Q14314	439 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	CYTH1	Q15438	398 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	MYLK3	Q32MK0	819 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	ERMARD	Q5T6L9	678 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	SEL1L3	Q68CR1	1132 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	NAPEPLD	Q6IQ20	393 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	PARS2	Q7L3T8	475 aa	Known RBP	14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	PRPF39	Q86UA1	669 aa	Known RBP	14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	TP53INP2	Q8IXH6	220 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	PLPP6	Q8IY26	295 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	OR2AP1	Q8NGE2	309 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	RHBDD1	Q8TEB9	315 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	ANP32B	Q92688	251 aa	Known RBP	14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	SYN2	Q92777	582 aa	Predicted RBP	14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	CCDC114	Q96M63	670 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	ELF4	Q99607	663 aa	Predicted RBP	14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	MYOC	Q99972	504 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	SLC39A8	Q9C0K1	460 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	THAP2	Q9H0W7	228 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	DHX35	Q9H5Z1	703 aa	Known RBP	14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	ZDHHC6	Q9H6R6	413 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	LRRC19	Q9H756	370 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	PREB	Q9HCU5	417 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	FZD3	Q9NPG1	666 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	KLK13	Q9UKR3	277 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	PLXNA2	O75051	1894 aa		14.41	□□□□□ -0.1
EDC4-210	ENST00000575507	NYNRIN	Q9P2P1	1898 aa	Known RBP	14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	C1QTNF9B	B2RNN3	333 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507		J3KR12	359 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	SPINT1	O43278	529 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	PCDHGA12	O60330	932 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	TMCC1	O94876	653 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	TPM1	P09493	284 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	ATXN1L	P0C7T5	689 aa	Known RBP	14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	C1QTNF9	P0C862	333 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	ADRB3	P13945	408 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	ITIH2	P19823	946 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	CASP14	P31944	242 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	ABL2	P42684	1182 aa		14.4	□□□□□ -0.1
EDC4-210	ENST00000575507	YBEY	P58557	167 aa	Predicted RBP	14.4	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms