RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SCAMP1O15126 338 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 ATXN7O15265 892 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 AP1G1O43747 822 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 SRGAP2O75044 1071 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 ZNF821O75541 412 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 ENDOD1O94919 500 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 LSM8O95777 96 aaKnown RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 GIMD1P0DJR0 217 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 FLT3P36888 993 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 DUSP3P51452 185 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 CCNHP51946 323 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 PCBP4P57723 403 aaKnown RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 UBE2HP62256 183 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 ARF5P84085 180 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 TLE3Q04726 772 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 SLC20A2Q08357 652 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 C19orf57Q0VDD7 668 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 DRAP1Q14919 205 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 VWA3BQ502W6 1294 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 TAF3Q5VWG9 929 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 Q6ZSR6 202 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 PARS2Q7L3T8 475 aaKnown RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 PARGQ86W56 976 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 FAM131BQ86XD5 332 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 SPACA3Q8IXA5 215 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 FAM181AQ8N9Y4 354 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 ZNF248Q8NDW4 579 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 SLC39A7Q92504 469 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 APOLD1Q96LR9 279 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 LGMNQ99538 433 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 HEPHQ9BQS7 1158 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 SLC17A9Q9BYT1 436 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 ZNF212Q9UDV6 495 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 PCDHB1Q9Y5F3 818 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 FHOD1Q9Y613 1164 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 HS3ST3A1Q9Y663 406 aa10.65□□□□□ -0.7
TVP23B-208ENST00000575261 TDRD6O60522 2096 aaKnown RBP10.65□□□□□ -0.7
TVP23B-208ENST00000575261 CXorf51AA0A1B0GTR3 108 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 TEX51A0A1B0GUA7 166 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 GOLGA8SH3BPF8 625 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 PES1O00541 588 aaKnown RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 RIOK3O14730 519 aaKnown RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 OPA1O60313 960 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 ZMPSTE24O75844 475 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 NME1P15531 152 aaKnown RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 L1CAMP32004 1257 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 ETFBP38117 255 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 RABIFP47224 123 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 DNA2P51530 1060 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 GEMIN4P57678 1058 aaKnown RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 GABREP78334 506 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 GNA12Q03113 381 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 CCDC173Q0VFZ6 552 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 C2CD6Q53TS8 623 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 CARD16Q5EG05 197 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 MIIPQ5JXC2 388 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 CDCP2Q5VXM1 449 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 ZCCHC8Q6NZY4 707 aaKnown RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 ARCQ7LC44 396 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 GPR155Q7Z3F1 870 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 BNIPLQ7Z465 357 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 DRC7Q8IY82 874 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 LSMEM2Q8N112 164 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 LSM14AQ8ND56 463 aaKnown RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 DENND6BQ8NEG7 585 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 ZNF548Q8NEK5 533 aaPredicted RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 EPS8L1Q8TE68 723 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 FEM1CQ96JP0 617 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 BMFQ96LC9 184 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 CFAP57Q96MR6 1250 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 ZNF578Q96N58 590 aaPredicted RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 TUBGCP2Q9BSJ2 902 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 TM6SF2Q9BZW4 377 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 ZDHHC6Q9H6R6 413 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 NCKIPSDQ9NZQ3 722 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 PPARGC1AQ9UBK2 798 aaKnown RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 FCF1Q9Y324 198 aaKnown RBP10.64□□□□□ -0.71
TVP23B-208ENST00000575261 RAI2Q9Y5P3 530 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 FADS3Q9Y5Q0 445 aa10.64□□□□□ -0.71
TVP23B-208ENST00000575261 ZNF462Q96JM2 2506 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 FLNBO75369 2602 aaKnown RBP10.63□□□□□ -0.71
TVP23B-208ENST00000575261 TENM4Q6N022 2769 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 LY6G6EA0A0G2JKS1 128 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 SPTY2D1-AS1A0A0U1RR47 76 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 FAM170AA1A519 330 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 POM121BA6NF01 834 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 F8VZ95 297 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 K7ESM1 405 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 NEMP1O14524 444 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 FPGTO14772 594 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 USP12O75317 370 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 CSO75390 466 aaKnown RBP10.63□□□□□ -0.71
TVP23B-208ENST00000575261 NEBLO76041 1014 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 DXOO77932 396 aaKnown RBP10.63□□□□□ -0.71
TVP23B-208ENST00000575261 PAK4O96013 591 aaPredicted RBP10.63□□□□□ -0.71
TVP23B-208ENST00000575261 CSF2P04141 144 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 PRB1P04280 392 aa10.63□□□□□ -0.71
TVP23B-208ENST00000575261 MPOP05164 745 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms