RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 TMEM248Q9NWD8 314 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 CPSF2Q9P2I0 782 aaKnown RBP24■■□□□ 1.43
NPLOC4-217ENST00000574897 TCAF1Q9Y4C2 921 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 TIMM44O43615 452 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 GJB3O75712 270 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 SERPINE1P05121 402 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 COL6A1P12109 1028 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 RPL17P18621 184 aaKnown RBP23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 ZNF460Q14592 562 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 RINLQ6ZS11 566 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 ATP6V0D2Q8N8Y2 350 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 TLR8Q9NR97 1041 aaKnown RBP23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 LAMA2P24043 3122 aaKnown RBP23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 TBC1D4O60343 1298 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 PQBP1O60828 265 aaKnown RBP23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 RALBP11234 206 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 ARCN1P48444 511 aaKnown RBP23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 DSC2Q02487 901 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 KDELC1Q6UW63 502 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 NAPRTQ6XQN6 538 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 MAVSQ7Z434 540 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 MFSD6LQ8IWD5 586 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 SLAIN1Q8ND83 568 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 PPHLN1Q8NEY8 458 aaKnown RBP23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 BTN2A3PQ96KV6 586 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 CLIC5Q9NZA1 410 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 CDY1Q9Y6F8 540 aa23.99■■□□□ 1.43
NPLOC4-217ENST00000574897 G3V2L1 256 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 AP3B1O00203 1094 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 ATF6P18850 670 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 CD86P42081 329 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 RASSF2P50749 326 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 ALDH18A1P54886 795 aaKnown RBP23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 BFSP2Q13515 415 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 RAPH1Q70E73 1250 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 SLC41A1Q8IVJ1 513 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.98■■□□□ 1.432e-6■■■□□ 14.8
NPLOC4-217ENST00000574897 PIWIL2Q8TC59 973 aaKnown RBP23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 RILPQ96NA2 401 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 GPR22Q99680 433 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 CADM1Q9BY67 442 aaKnown RBP23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 WWP1Q9H0M0 922 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 ENTPD7Q9NQZ7 604 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 ZNF212Q9UDV6 495 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 ETFBP38117 255 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 KCNQ1P51787 676 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 CCL23P55773 120 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 ANO4Q32M45 955 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 NADSYN1Q6IA69 706 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 NPAS4Q8IUM7 802 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 CRIPAKQ8N1N5 446 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 SPPL2BQ8TCT7 592 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 ZNF296Q8WUU4 475 aaPredicted RBP23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 SEPT8Q92599 483 aa23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 RPRD1AQ96P16 312 aaPredicted RBP23.98■■□□□ 1.43
NPLOC4-217ENST00000574897 IGLV3-10A0A075B6K4 115 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 RTN3O95197 1032 aaPredicted RBP23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 MPOP05164 745 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 GM2AP17900 193 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 NDST2P52849 883 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 DBN1Q16643 649 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 UNC93B1Q9H1C4 597 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 RHOJQ9H4E5 214 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 SP110Q9HB58 689 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 MICAL3Q7RTP6 2002 aa23.97■■□□□ 1.43
NPLOC4-217ENST00000574897 AURKAO14965 403 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 MMP2P08253 660 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 ACVRL1P37023 503 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 GLRBP48167 497 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 HNRNPDQ14103 355 aaKnown RBP23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 USP10Q14694 798 aaKnown RBP23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 CCDC153Q494R4 210 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 RFWD3Q6PCD5 774 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 PGBD5Q8N414 524 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 FBXO27Q8NI29 283 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 IMP4Q96G21 291 aaKnown RBP23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 UNKQ9C0B0 810 aaKnown RBP23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 SLC25A51Q9H1U9 297 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 TK2O00142 265 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 TLR5O60602 858 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 IGLV3-27P01718 113 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 ENO1P06733 434 aaKnown RBP23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 DNAJB2P25686 324 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 SLC1A2P43004 574 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 CSRP3P50461 194 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 UBAP2LQ14157 1087 aaKnown RBP23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 VWA5B1Q5TIE3 1220 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 MARC1Q5VT66 337 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 CFAP52Q8N1V2 620 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 TREX1Q9NSU2 369 aa23.96■■□□□ 1.43
NPLOC4-217ENST00000574897 CHD5Q8TDI0 1954 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 CAPN14A8MX76 684 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 UPP2O95045 317 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 ESRRAP11474 423 aaPredicted RBP23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 ATN1P54259 1190 aaPredicted RBP23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 ABCE1P61221 599 aaKnown RBP23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 TUBB3Q13509 450 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 POTEHQ6S545 545 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms