RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 GMEB2Q9UKD1 530 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 PCDHA3Q9Y5H8 950 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 RALGAPA1Q6GYQ0 2036 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 IGHV1OR15-9A0A0B4J2B8 117 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 C3orf70A6NLC5 250 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 J3KR12 359 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 MID1O15344 667 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZSCAN12O43309 604 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 MFSD11O43934 449 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 NEBLO76041 1014 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 POP4O95707 220 aaKnown RBP12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 CD160O95971 181 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 IGLV3-19P01714 112 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 NR2C2P49116 596 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCNHP51946 323 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 RPL6Q02878 288 aaKnown RBP12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCDC173Q0VFZ6 552 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 SRSF5Q13243 272 aaKnown RBP12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 LBRQ14739 615 aaKnown RBP12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 PLK5Q496M5 336 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 SLC9A4Q6AI14 798 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 LAIR1Q6GTX8 287 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 MFSD7Q6UXD7 560 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 LEKR1Q6ZMV7 388 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 SPOCD1Q6ZMY3 1216 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 DPY19L3Q6ZPD9 716 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 NT5DC3Q86UY8 548 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 PIP4K2CQ8TBX8 421 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 FOXJ1Q92949 421 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 TM6SF2Q9BZW4 377 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 BTBD1Q9H0C5 482 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZDHHC6Q9H6R6 413 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 PDFQ9HBH1 243 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 LZTFL1Q9NQ48 299 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 SEPT3Q9UH03 358 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 PPM1HQ9ULR3 514 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 FZD4Q9ULV1 537 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 INVSQ9Y283 1065 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 PPP2R2CQ9Y2T4 447 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 MFHAS1Q9Y4C4 1052 aa12.98□□□□□ -0.33
TRAPPC1-206ENST00000573989 KPNA3O00505 521 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 PPP1R12AO14974 1030 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 MAFKO60675 156 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZNF821O75541 412 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 RNASEH2AO75792 299 aaKnown RBP12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 TGM2P21980 687 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCNCP24863 283 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 GARSP41250 739 aaKnown RBP12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 DPP6P42658 865 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 CDKN2BP42772 138 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 MAPK8P45983 427 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 GALNT2Q10471 571 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZNF235Q14590 738 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 PDK1Q15118 436 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCDC181Q5TID7 509 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 KAZNQ674X7 775 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 PMS2CLQ68D20 193 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 HDDC3Q8N4P3 179 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 FAM160A2Q8N612 972 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 PQLC3Q8N755 202 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 SUMF1Q8NBK3 374 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCNYQ8ND76 341 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 TRIM58Q8NG06 486 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 GRIN3AQ8TCU5 1115 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 OSBPL1AQ9BXW6 950 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 PCED1AQ9H1Q7 454 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 WSB2Q9NYS7 404 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 NCDNQ9UBB6 729 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 HEY1Q9Y5J3 304 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 ACTL7AQ9Y615 435 aa12.97□□□□□ -0.33
TRAPPC1-206ENST00000573989 SDK1Q7Z5N4 2213 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 A0A0U1RQJ8 604 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 A0A1W2PP55 124 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 LRRC72A6NJI9 287 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 KRIT1O00522 736 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 SLC7A4O43246 635 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 CST8O60676 142 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 LEFTY1O75610 366 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 FTCDO95954 541 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 CSNK1DP48730 415 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 MARCKSL1P49006 195 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 DHPSP49366 369 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 DYNLT1P63172 113 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZNF33AQ06730 810 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 NSUN2Q08J23 767 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 HNRNPDQ14103 355 aaKnown RBP12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 CYTH1Q15438 398 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 LPAL2Q16609 132 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 TAZQ16635 292 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 MYLK3Q32MK0 819 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 SYCP2LQ5T4T6 812 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 ARHGAP36Q6ZRI8 547 aa12.96□□□□□ -0.33
TRAPPC1-206ENST00000573989 FAM124AQ86V42 546 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms