RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 ARF5P84085 180 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 ELAVL3Q14576 367 aaKnown RBP13.79□□□□□ -0.2
RPAIN-213ENST00000573577 TTC31Q49AM3 519 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-213ENST00000573577 AASDHQ4L235 1098 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-213ENST00000573577 PEAR1Q5VY43 1037 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-213ENST00000573577 AFMIDQ63HM1 303 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 TCEAL6Q6IPX3 200 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 LINGO4Q6UY18 593 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 DSG4Q86SJ6 1040 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 FAM124AQ86V42 546 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 SLC41A1Q8IVJ1 513 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 RCOR2Q8IZ40 523 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 STK40Q8N2I9 435 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 EFCAB3Q8N7B9 438 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 UBL4BQ8N7F7 174 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 EXD1Q8NHP7 514 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 PCDH19Q8TAB3 1148 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 FOXJ1Q92949 421 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 TCEAL3Q969E4 200 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 RMDN1Q96DB5 314 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 ZNF419Q96HQ0 510 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-213ENST00000573577 RNF157Q96PX1 679 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 GPR174Q9BXC1 333 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 SLC39A8Q9C0K1 460 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 KLC2Q9H0B6 622 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
RPAIN-213ENST00000573577 SP110Q9HB58 689 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 PILRBQ9UKJ0 227 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 SCML1Q9UN30 329 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 THADAQ6YHU6 1953 aa13.79□□□□□ -0.2
RPAIN-213ENST00000573577 A0A0U1RQJ8 604 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 ZSCAN12O43309 604 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 GDF9O60383 454 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 MT-CO1P00395 513 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 CTNNA2P26232 953 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 ID4P47928 161 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 PAPOLAP51003 745 aaKnown RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 RWDD2BP57060 319 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 TFDP2Q14188 446 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 PAFAH1B3Q15102 231 aaKnown RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 CST6Q15828 149 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 INO80DQ53TQ3 878 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 SYCP2LQ5T4T6 812 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 C22orf39Q6P5X5 142 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 NT5DC3Q86UY8 548 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 MMAAQ8IVH4 418 aaKnown RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 CCDC50Q8IVM0 306 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 ARHGAP12Q8IWW6 846 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 ATPAF2Q8N5M1 289 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 PCDH20Q8N6Y1 951 aaKnown RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 NPWQ8N729 165 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 CADM4Q8NFZ8 388 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 NETO1Q8TDF5 533 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 ISG20Q96AZ6 181 aaKnown RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 ZNF830Q96NB3 372 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 FAM129BQ96TA1 746 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 PCED1AQ9H1Q7 454 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 LZTFL1Q9NQ48 299 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 TMEM74BQ9NUR3 256 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 ETNK2Q9NVF9 386 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 UBA2Q9UBT2 640 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 CDV3Q9UKY7 258 aaKnown RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
RPAIN-213ENST00000573577 ATXN2Q99700 1313 aaKnown RBP13.78□□□□□ -0.2
RPAIN-213ENST00000573577 C3orf70A6NLC5 250 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-213ENST00000573577 MEI4A8MW99 385 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 PATE3B3GLJ2 98 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 APOL1O14791 398 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 KHNYNO15037 678 aaKnown RBP13.77□□□□□ -0.21
RPAIN-213ENST00000573577 ALOX15BO15296 676 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 MID1O15344 667 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 PRAMEF11O60813 436 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 ADH1BP00325 375 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 MX2P20592 715 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 SDHBP21912 280 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 ACSL1P33121 698 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 PSMD8P48556 350 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 COPS2P61201 443 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 IL10RBQ08334 325 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 RFTN1Q14699 578 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-213ENST00000573577 TFDP3Q5H9I0 405 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 WDR45BQ5MNZ6 344 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 TMCO4Q5TGY1 634 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 NCBP2-AS2Q69YL0 99 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 MFSD7Q6UXD7 560 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 Q6ZVU0 165 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 BZW1Q7L1Q6 419 aaKnown RBP13.77□□□□□ -0.21
RPAIN-213ENST00000573577 RFX6Q8HWS3 928 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 PLPP6Q8IY26 295 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 TRIM58Q8NG06 486 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 NSMCE1Q8WV22 266 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 KRT35Q92764 455 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 BTBD1Q9H0C5 482 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 RXFP3Q9NSD7 469 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 FBXL12Q9NXK8 326 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms