RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 TBC1D30Q9Y2I9 924 aa7.64□□□□□ -1.19
NUP88-205ENST00000572809 GON4LQ3T8J9 2241 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 ITIH6Q6UXX5 1313 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 A0A1B0GTW7 788 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 MEI4A8MW99 385 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 I6L893 689 aaPredicted RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 TEX33O43247 280 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 SRGAP2O75044 1071 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 CNTN5O94779 1100 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 ADRB1P08588 477 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 ARAFP10398 606 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 KRT3P12035 628 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 FERP16591 822 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 SLC8A1P32418 973 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 RDXP35241 583 aaKnown RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 NSFP46459 744 aaKnown RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 NUMBP49757 651 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 STK19P49842 368 aaPredicted RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 ZNF165P49910 485 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 IRAK1P51617 712 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 KRT83P78385 493 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 ATP11AP98196 1134 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 CST6Q15828 149 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 CLEC16AQ2KHT3 1053 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 ARL13BQ3SXY8 428 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 CCDC14Q49A88 953 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 TTC31Q49AM3 519 aaPredicted RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 ACCSLQ4AC99 568 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.63□□□□□ -1.19
NUP88-205ENST00000572809 FILIP1LQ4L180 1135 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 ALFQ53S48 1182 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 N4BP2L1Q5TBK1 243 aaPredicted RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 TRNP1Q6NT89 227 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 LRSAM1Q6UWE0 723 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 USP30Q70CQ3 517 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 CHSY3Q70JA7 882 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 BNIPLQ7Z465 357 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 MMAAQ8IVH4 418 aaKnown RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 HDDC3Q8N4P3 179 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 EMC1Q8N766 993 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 OR52K2Q8NGK3 314 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 GANCQ8TET4 914 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 RXFP2Q8WXD0 754 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 AGPAT1Q99943 283 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 OMDQ99983 421 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 C11orf70Q9BRQ4 267 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 MUC3BQ9H195 1237 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 PCED1AQ9H1Q7 454 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 NEUROG2Q9H2A3 272 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 C6orf106Q9H6K1 298 aaPredicted RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 SGK2Q9HBY8 427 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 FSCN3Q9NQT6 498 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 METTL5Q9NRN9 209 aaKnown RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 SEPT11Q9NVA2 429 aaKnown RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 FBXL12Q9NXK8 326 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 ADAM22Q9P0K1 906 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 EIF2B4Q9UI10 523 aaKnown RBP7.63□□□□□ -1.19
NUP88-205ENST00000572809 SLC25A13Q9UJS0 675 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 OR51B4Q9Y5P0 310 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 SNX10Q9Y5X0 201 aa7.63□□□□□ -1.19
NUP88-205ENST00000572809 CKAP5Q14008 2032 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 DMXL1Q9Y485 3027 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 TNRC6BQ9UPQ9 1833 aaKnown RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 IGLV3-10A0A075B6K4 115 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 SIGLEC16A6NMB1 481 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 E9PAM4 449 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 MID1O15344 667 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 BCAT2O15382 392 aaPredicted RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 OPHN1O60890 802 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 SEMA4FO95754 770 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 IL1BP01584 269 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 CALB1P05937 261 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 RHOCP08134 193 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 FAM157BP0CG42 384 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 CEACAM1P13688 526 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 CSRP1P21291 193 aaKnown RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 TNFAIP3P21580 790 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 C5AR1P21730 350 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 CES1P23141 567 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 OR1E1P30953 314 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 SDC4P31431 198 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 RFC1P35251 1148 aaPredicted RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 ADRA1BP35368 520 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 NOVA1P51513 510 aaKnown RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 GALCP54803 685 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 PTP4A2Q12974 167 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 DLG2Q15700 870 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 CDO1Q16878 200 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 ACAD10Q6JQN1 1059 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 PSAPL1Q6NUJ1 521 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 WDR59Q6PJI9 974 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 IRF2BP2Q7Z5L9 587 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 SETD3Q86TU7 594 aaPredicted RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 FAM131BQ86XD5 332 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 PHF13Q86YI8 300 aaPredicted RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 ZNF683Q8IZ20 524 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 STK40Q8N2I9 435 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 ZCCHC9Q8N567 271 aaKnown RBP7.62□□□□□ -1.19
NUP88-205ENST00000572809 MINDY1Q8N5J2 469 aa7.62□□□□□ -1.19
NUP88-205ENST00000572809 JOSD2Q8TAC2 188 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms