RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 PLD5Q8N7P1 536 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 LRRC57Q8N9N7 239 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 TSEN2Q8NCE0 465 aaKnown RBP8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 CADM4Q8NFZ8 388 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 OR2AP1Q8NGE2 309 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 OR6K2Q8NGY2 324 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 CASKIN2Q8WXE0 1202 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 KRT35Q92764 455 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 SPACA7Q96KW9 195 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 OMDQ99983 421 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 HEPHQ9BQS7 1158 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 BTBD1Q9H0C5 482 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 C6orf106Q9H6K1 298 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 EBF2Q9HAK2 575 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 LUC7LQ9NQ29 371 aaKnown RBP8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 UBA2Q9UBT2 640 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 EVLQ9UI08 416 aaPredicted RBP8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 GPR179Q6PRD1 2367 aa8.84□□□□□ -0.99
TRAPPC1-203ENST00000571739 CEP192Q8TEP8 1941 aa8.84□□□□□ -1
TRAPPC1-203ENST00000571739 NYNRINQ9P2P1 1898 aaKnown RBP8.83□□□□□ -1
TRAPPC1-203ENST00000571739 SPAG17Q6Q759 2223 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 MACROD2A1Z1Q3 448 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 LRRD1A4D1F6 860 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 GOLGA6L6A8MZA4 724 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 ZNF487B1APH4 448 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 ARHGAP6O43182 974 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 SPOPO43791 374 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 MFSD11O43934 449 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 NDUFS2O75306 463 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 GJB3O75712 270 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 PALMO75781 387 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 RNASEH2AO75792 299 aaKnown RBP8.83□□□□□ -1
TRAPPC1-203ENST00000571739 MAP3K6O95382 1288 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 POP4O95707 220 aaKnown RBP8.83□□□□□ -1
TRAPPC1-203ENST00000571739 ADH1BP00325 375 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 GSRP00390 522 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 KRT10P13645 584 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 CDKN2BP42772 138 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 NAP1L1P55209 391 aaKnown RBP8.83□□□□□ -1
TRAPPC1-203ENST00000571739 GEMIN4P57678 1058 aaKnown RBP8.83□□□□□ -1
TRAPPC1-203ENST00000571739 RHOAP61586 193 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 SNRPD1P62314 119 aaKnown RBP8.83□□□□□ -1
TRAPPC1-203ENST00000571739 CREB5Q02930 508 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 GBE1Q04446 702 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 GALNT2Q10471 571 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 KIF5AQ12840 1032 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 CNTN1Q12860 1018 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 LLGL1Q15334 1064 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 FAM182AQ5T1J6 154 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 ZFYVE27Q5T4F4 411 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 DCAF12L1Q5VU92 463 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 FAM46CQ5VWP2 391 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 SLC9A4Q6AI14 798 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 DAAM2Q86T65 1068 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 KIAA1328Q86T90 577 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 NT5DC3Q86UY8 548 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 VSIG1Q86XK7 387 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 PGBD5Q8N414 524 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 C1orf216Q8TAB5 229 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 KIAA1524Q8TCG1 905 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 GANCQ8TET4 914 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 DNASE2BQ8WZ79 361 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 PIGKQ92643 395 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 ORAI3Q9BRQ5 295 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 SMOC1Q9H4F8 434 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 SGK2Q9HBY8 427 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 RXFP3Q9NSD7 469 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 SEMA4GQ9NTN9 838 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 DDX56Q9NY93 547 aaKnown RBP8.83□□□□□ -1
TRAPPC1-203ENST00000571739 DTLQ9NZJ0 730 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 NCDNQ9UBB6 729 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 IL36AQ9UHA7 158 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 GMEB2Q9UKD1 530 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 PILRBQ9UKJ0 227 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 FZD4Q9ULV1 537 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 NCKAP1Q9Y2A7 1128 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 FARP1Q9Y4F1 1045 aaPredicted RBP8.83□□□□□ -1
TRAPPC1-203ENST00000571739 PCDHGA5Q9Y5G8 931 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 PCDHA3Q9Y5H8 950 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 SLCO1B1Q9Y6L6 691 aa8.83□□□□□ -1
TRAPPC1-203ENST00000571739 TTC24A2A3L6 582 aaPredicted RBP8.82□□□□□ -1
TRAPPC1-203ENST00000571739 FAM47DPA6NHR8 397 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 PATE3B3GLJ2 98 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 C1QTNF3-AMACRE9PGA6 284 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 KPNA3O00505 521 aaPredicted RBP8.82□□□□□ -1
TRAPPC1-203ENST00000571739 KRIT1O00522 736 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 PSTPIP1O43586 416 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 ZRANB2O95218 330 aaKnown RBP eCLIP8.82□□□□□ -1
TRAPPC1-203ENST00000571739 SEMA4FO95754 770 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 PRNPP04156 253 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 KRT1P04264 644 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 IGHV4-34P06331 123 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 ZNF806P0C7X5 589 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 CTNNA1P35221 906 aaKnown RBP8.82□□□□□ -1
TRAPPC1-203ENST00000571739 MPLP40238 635 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 GARSP41250 739 aaKnown RBP8.82□□□□□ -1
TRAPPC1-203ENST00000571739 RECQLP46063 649 aaPredicted RBP8.82□□□□□ -1
TRAPPC1-203ENST00000571739 CSNK1DP48730 415 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 IRX4P78413 519 aa8.82□□□□□ -1
TRAPPC1-203ENST00000571739 NSUN2Q08J23 767 aaKnown RBP eCLIP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms