RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 TMEM135Q86UB9 458 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 TMC8Q8IU68 726 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 HS6ST3Q8IZP7 471 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 C12orf76Q8N812 135 aaPredicted RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 IGSF8Q969P0 613 aa17.62■□□□□ 0.41
RPAIN-208ENST00000571043 PAIP2Q9BPZ3 127 aaKnown RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 ZNF334Q9HCZ1 680 aaPredicted RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 RBM22Q9NW64 420 aaKnown RBP eCLIP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 PIH1D1Q9NWS0 290 aaKnown RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 DNMT3BQ9UBC3 853 aaKnown RBP17.62■□□□□ 0.41
RPAIN-208ENST00000571043 SPTBN5Q9NRC6 3674 aaKnown RBP17.61■□□□□ 0.41
RPAIN-208ENST00000571043 EYSQ5T1H1 3165 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 GOLGA6L7A0A1B0GV03 622 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 FAM237BA0A1B0GVD1 139 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 USP12O75317 370 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 CNTN5O94779 1100 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 HMBSP08397 361 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 ALADP13716 330 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 FOXN2P32314 431 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 CCNFP41002 786 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 RENBPP51606 427 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 YBEYP58557 167 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-208ENST00000571043 TNK2Q07912 1038 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 ALFQ53S48 1182 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 SYCE2Q6PIF2 218 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 LVRNQ6Q4G3 990 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 GAREM2Q75VX8 874 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 SRLQ86TD4 932 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 TMEM150AQ86TG1 271 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 CHSY1Q86X52 802 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 CCDC117Q8IWD4 279 aaPredicted RBP17.61■□□□□ 0.41
RPAIN-208ENST00000571043 DEFB123Q8N688 67 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 ANKS4BQ8N8V4 417 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 TCP10LQ8TDR4 215 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 MYLIPQ8WY64 445 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 GRAMD1AQ96CP6 724 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 CABS1Q96KC9 395 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 GUCD1Q96NT3 240 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 ELAC2Q9BQ52 826 aaKnown RBP17.61■□□□□ 0.41
RPAIN-208ENST00000571043 CORO1BQ9BR76 489 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 TRPM5Q9NZQ8 1165 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 CLEC1BQ9P126 229 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 ZNF212Q9UDV6 495 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 RPS6KL1Q9Y6S9 549 aa17.61■□□□□ 0.41
RPAIN-208ENST00000571043 SNX3O60493 162 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 UGT1A9O60656 530 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 RFPL1O75677 317 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 PEX11BO96011 259 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 HLA-DQB2P05538 268 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 PYGBP11216 843 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 TACR2P21452 398 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 LTBRP36941 435 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 OLIG2Q13516 323 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 PARP15Q460N3 678 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 ARMC3Q5W041 872 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 TMC5Q6UXY8 1006 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 TFAP2DQ7Z6R9 452 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
RPAIN-208ENST00000571043 LEMD2Q8NC56 503 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 SMG7Q92540 1137 aaKnown RBP17.6■□□□□ 0.41
RPAIN-208ENST00000571043 AZIN2Q96A70 460 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 PLD4Q96BZ4 506 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 PABPC5Q96DU9 382 aaKnown RBP17.6■□□□□ 0.41
RPAIN-208ENST00000571043 HMCESQ96FZ2 354 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 CERS2Q96G23 380 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 RPRD1AQ96P16 312 aaPredicted RBP17.6■□□□□ 0.41
RPAIN-208ENST00000571043 KLF6Q99612 283 aaPredicted RBP17.6■□□□□ 0.41
RPAIN-208ENST00000571043 TBL1YQ9BQ87 522 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 VPS11Q9H270 941 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 UGT1A7Q9HAW7 530 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 UGT1A10Q9HAW8 530 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 UGT1A8Q9HAW9 530 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 ASAH2Q9NR71 780 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 FGFR1OP2Q9NVK5 253 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 HCFC1R1Q9NWW0 138 aa17.6■□□□□ 0.41
RPAIN-208ENST00000571043 RRP15Q9Y3B9 282 aaKnown RBP17.6■□□□□ 0.41
RPAIN-208ENST00000571043 PRUNE2Q8WUY3 3088 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.59■□□□□ 0.41
RPAIN-208ENST00000571043 GOLGA8RI6L899 631 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 ACSL4O60488 711 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 NEBLO76041 1014 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 KIAA0754O94854 1291 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 FGF19O95750 216 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 GABRR2P28476 465 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 SLC11A2P49281 568 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 DLX2Q07687 328 aaPredicted RBP17.59■□□□□ 0.41
RPAIN-208ENST00000571043 ANKRD20A4Q4UJ75 823 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 NADSYN1Q6IA69 706 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 PACS1Q6VY07 963 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 GPR149Q86SP6 731 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 TEX26Q8N6G2 289 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 ZNF419Q96HQ0 510 aaPredicted RBP17.59■□□□□ 0.41
RPAIN-208ENST00000571043 FCRL3Q96P31 734 aaPredicted RBP17.59■□□□□ 0.41
RPAIN-208ENST00000571043 SLC25A51Q9H1U9 297 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 CLDND1Q9NY35 253 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 SOX13Q9UN79 622 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 C5orf42Q9H799 3197 aa17.59■□□□□ 0.41
RPAIN-208ENST00000571043 ZCWPW2A0A1B0GU75 182 aa17.58■□□□□ 0.41
RPAIN-208ENST00000571043 F5H5T6 163 aa17.58■□□□□ 0.41
RPAIN-208ENST00000571043 COPEO14579 308 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms