RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TACC1O75410 805 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 KRT37O76014 449 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CELF2O95319 508 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 GCNT3O95395 438 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 IVLP07476 585 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 GJB1P08034 283 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PLEKP08567 350 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 CFHP08603 1231 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 FGF4P08620 206 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CCNYL3P0C7X3 344 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TXNP10599 105 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 GHRP10912 638 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CDK4P11802 303 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 MYL4P12829 197 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 LAMP2P13473 410 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RARGP13631 454 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 KRT4P19013 534 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 UBA1P22314 1058 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 RPL13P26373 211 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 PTBP1P26599 531 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMG6-208ENST00000570874 ANXA13P27216 316 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CASP14P31944 242 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RFC2P35250 354 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 IL12RB1P42701 662 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 GPR3P46089 330 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CASP4P49662 377 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RARRES1P49788 294 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CCR5P51681 352 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PRRX1P54821 245 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 EIF3EP60228 445 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 VBP1P61758 197 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 YPEL5P62699 121 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ERVK-24P63145 666 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TUBA4AP68366 448 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ELP6Q0PNE2 266 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ASPHQ12797 758 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 LMAN2Q12907 356 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 GRIK3Q13003 919 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 GPM6BQ13491 265 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ITGA7Q13683 1181 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RCN2Q14257 317 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 SNX17Q15036 470 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 POU4F3Q15319 338 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CCL15Q16663 113 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ATXN7L2Q5T6C5 722 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 ERMARDQ5T6L9 678 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CST9Q5W186 159 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 SPECC1LQ69YQ0 1117 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 GTF2IRD2BQ6EKJ0 949 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ETFRF1Q6IPR1 90 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 OGFOD3Q6PK18 319 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 METAP1DQ6UB28 335 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 RANBP10Q6VN20 620 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RAD9BQ6WBX8 426 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RNF19BQ6ZMZ0 732 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 FAM83HQ6ZRV2 1179 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 ANO5Q75V66 913 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 MARK2Q7KZI7 788 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 CYFIP1Q7L576 1253 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 NIPA1Q7RTP0 329 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 NLRP9Q7RTR0 991 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 NANOGNBQ7Z5D8 188 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PXKQ7Z7A4 578 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CPLX4Q7Z7G2 160 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ADGRG6Q86SQ4 1221 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 KIAA1328Q86T90 577 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 GTF2IRD2Q86UP8 949 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 VPS36Q86VN1 386 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 ARMC8Q8IUR7 673 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 SLC22A9Q8IVM8 553 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CCDC60Q8IWA6 550 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMG6-208ENST00000570874 SULF2Q8IWU5 870 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 FBXO16Q8IX29 292 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 PHC2Q8IXK0 858 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 TCAIMQ8N3R3 496 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 GUF1Q8N442 669 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 ANKRD13CQ8N6S4 541 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 MB21D1Q8N884 522 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RNF152Q8N8N0 203 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 HIPK4Q8NE63 616 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 OR13C2Q8NGS9 318 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 OR6S1Q8NH40 331 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 HUS1BQ8NHY5 278 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 CDC26Q8NHZ8 85 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 SETD6Q8TBK2 473 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 SLC22A8Q8TCC7 542 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 STT3BQ8TCJ2 826 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PPP1R13LQ8WUF5 828 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 THRSPQ92748 146 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 KIFAP3Q92845 792 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 SLC35B4Q969S0 331 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RMDN1Q96DB5 314 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 PGAP3Q96FM1 320 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 FAM84AQ96KN4 292 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 RPGRIP1Q96KN7 1286 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 INPP4AQ96PE3 977 aaPredicted RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 PPP1R10Q96QC0 940 aaKnown RBP3.63□□□□□ -1.83
SMG6-208ENST00000570874 TUBGCP5Q96RT8 1024 aa3.63□□□□□ -1.83
SMG6-208ENST00000570874 LMF1Q96S06 567 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms