RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 LEFTY1O75610 366 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 GSRP00390 522 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CAPNS1P04632 268 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 PRKCIP41743 596 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ARRB1P49407 418 aaPredicted RBP17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TMEM259Q4ZIN3 620 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CARD16Q5EG05 197 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 HORMAD1Q86X24 394 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 DRC7Q8IY82 874 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CASKIN2Q8WXE0 1202 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 HEPHQ9BQS7 1158 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SPON2Q9BUD6 331 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 EDEM3Q9BZQ6 932 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 DYRK4Q9NR20 520 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 AIPL1Q9NZN9 384 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CFAP47Q6ZTR5 3102 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 EIF3CLB5ME19 914 aaKnown RBP17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 KCNK3O14649 394 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RAMP2O60895 175 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 GZMAP12544 262 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 EPHA8P29322 1005 aaPredicted RBP17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ZNF165P49910 485 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CCNHP51946 323 aaPredicted RBP17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 NEK3P51956 506 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RPL7AP62424 266 aaKnown RBP17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FILIP1LQ4L180 1135 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FIGNQ5HY92 759 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 EFHC2Q5JST6 749 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SFMBT2Q5VUG0 894 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 PLEKHA7Q6IQ23 1121 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CCNI2Q6ZMN8 369 aaPredicted RBP17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 KANSL1Q7Z3B3 1105 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 PHLDB2Q86SQ0 1253 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RTL3Q8N8U3 475 aaKnown RBP17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 VOPP1Q96AW1 172 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 MCEEQ96PE7 176 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 EIF3CQ99613 913 aaKnown RBP17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TTYH3Q9C0H2 523 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TNKS2Q9H2K2 1166 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FZD10Q9ULW2 581 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 HPCAL4Q9UM19 191 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 PCDHGA1Q9Y5H4 931 aa17.41■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RNF103O00237 685 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 KDELR3O43731 214 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 BNIP3LO60238 219 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ATXN1LP0C7T5 689 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CDK4P11802 303 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ACVRL1P37023 503 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 YBEYP58557 167 aaPredicted RBP17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 STAT4Q14765 748 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 IQCB1Q15051 598 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 POLD3Q15054 466 aaPredicted RBP17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ZNF284Q2VY69 593 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 POM121L1PQ3SYA9 428 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 INO80DQ53TQ3 878 aaPredicted RBP17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ARSIQ5FYB1 569 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 KIAA1161Q6NSJ0 714 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RWDD4Q6NW29 188 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TMPRSS7Q7RTY8 843 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SPATS2Q86XZ4 545 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FNIP1Q8TF40 1166 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RAB7BQ96AH8 199 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 EPAS1Q99814 870 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 MAGEB5Q9BZ81 275 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 NOL6Q9H6R4 1146 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SEPT11Q9NVA2 429 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 DONSONQ9NYP3 566 aa17.4■□□□□ 0.38
MAP1LC3B-208ENST00000570189 A0A1W2PQU0 124 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 LRRC53A6NM62 1247 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 FGF10O15520 208 aaPredicted RBP17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 KRT37O76014 449 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 C1SP09871 688 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ADRB3P13945 408 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DESP17661 470 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TNFAIP3P21580 790 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 MAT2AP31153 395 aaKnown RBP17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 MAMLD1Q13495 774 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 CAVIN1Q6NZI2 390 aaKnown RBP17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 UMODL1-AS1Q8N2C9 162 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PNPLA1Q8N8W4 532 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 OR2AP1Q8NGE2 309 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 GRIN3AQ8TCU5 1115 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 OSBPL1AQ9BXW6 950 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 GPR27Q9NS67 375 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PARVAQ9NVD7 372 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 FTSJ1Q9UET6 329 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 DNAI1Q9UI46 699 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ZMIZ1Q9ULJ6 1067 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ZFR2Q9UPR6 939 aaKnown RBP17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 FCF1Q9Y324 198 aaKnown RBP17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 KNTC1P50748 2209 aa17.39■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ITGAVP06756 1048 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 HNRNPA2B1P22626 353 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 EPHB2P29323 1055 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SNRPD1P62314 119 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 RPS21P63220 83 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 OGDHQ02218 1023 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 NR1I3Q14994 352 aa17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SMAD1Q15797 465 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-208ENST00000570189 KLHL40Q2TBA0 621 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms