RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MYH4Q9Y623 1939 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ASTN1O14525 1302 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 GBF1Q92538 1859 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 LOC105369274A0A096LPK9 316 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 LOC102723532A0A0G2JNH3 316 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 GOLGA6L10A0A0M3HER8 536 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 GAGE10A6NGK3 116 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SH2D7A6NKC9 451 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM232C9JQI7 657 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 RNF113AO15541 343 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 TNFSF14O43557 240 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 TRIM13O60858 407 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CBFA2T3O75081 653 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 LMNAP02545 664 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 RNASE1P07998 156 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ZFYP08048 801 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SPARCP09486 303 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 WEE2P0C1S8 567 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 HGFP14210 728 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CHN1P15882 459 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 HK1P19367 917 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SLC6A2P23975 617 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PRKCHP24723 683 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PRKAR1BP31321 381 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ARL1P40616 181 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 EIF2DP41214 584 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PNPLA4P41247 253 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 DPP6P42658 865 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 TNNT3P45378 269 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 GATMP50440 423 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PGDP52209 483 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 STAT2P52630 851 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF134P52741 427 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PRKAG1P54619 331 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CDH15P55291 814 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 BEX3Q00994 111 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CNTN2Q02246 1040 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 HGFACQ04756 655 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PIGFQ07326 219 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ITGA7Q13683 1181 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 AAK1Q2M2I8 961 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PRR31Q5SQ13 230 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PLEKHS1Q5SXH7 462 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ATXN7L2Q5T6C5 722 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SLFN13Q68D06 897 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PLBD1Q6P4A8 553 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 IL27RAQ6UWB1 636 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CXCL17Q6UXB2 119 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SYNE3Q6ZMZ3 975 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 Q6ZUG5 572 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 FAM47EQ6ZV65 393 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 USP30Q70CQ3 517 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 TLK2Q86UE8 772 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 FAM160B2Q86V87 743 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 IQCA1Q86XH1 822 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF444Q8N0Y2 327 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 OR4N4Q8N0Y3 316 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 C17orf53Q8N3J3 647 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF366Q8N895 744 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ARL10Q8N8L6 244 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 KBTBD3Q8NAB2 608 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 FLCNQ8NFG4 579 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 NUDT10Q8NFP7 164 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ZFP28Q8NHY6 868 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SLC2A12Q8TD20 617 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SCFD2Q8WU76 684 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CHURC1Q8WUH1 139 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 JAKMIP2Q96AA8 810 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SH3KBP1Q96B97 665 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 NUDT11Q96G61 164 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 REXO5Q96IC2 774 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 AJUBAQ96IF1 538 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 JAKMIP1Q96N16 626 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 TRIB1Q96RU8 372 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 PIGSQ96S52 555 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 GPHA2Q96T91 129 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 NCAPGQ9BPX3 1015 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 DESI2Q9BSY9 194 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 HERC2P3Q9BVR0 1158 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 C1QTNF1Q9BXJ1 281 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 LRRCC1Q9C099 1032 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 FTOQ9C0B1 505 aaKnown RBP eCLIP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 HIPK3Q9H422 1215 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 RABEP2Q9H5N1 569 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CXorf36Q9H7Y0 433 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 GRPEL1Q9HAV7 217 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 RAVER2Q9HCJ3 691 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CD248Q9HCU0 757 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SEMA4BQ9NPR2 832 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ECHDC1Q9NTX5 307 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 RNF146Q9NTX7 359 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 MBNL3Q9NUK0 354 aaKnown RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 BEX4Q9NWD9 120 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 KCND2Q9NZV8 630 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 HCN3Q9P1Z3 774 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CHORDC1Q9UHD1 332 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 ADAMTS6Q9UKP5 1117 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 CORO1CQ9ULV4 474 aaPredicted RBP3.39□□□□□ -1.87
CNOT1-221ENST00000569924 SUFUQ9UMX1 484 aa3.39□□□□□ -1.87
CNOT1-221ENST00000569924 MRPS17Q9Y2R5 130 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms