RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ACKR2O00590 384 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 CBFA2T3O75081 653 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 HEXIM1O94992 359 aaKnown RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 KRT7P08729 469 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 CHN1P15882 459 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 HLA-DPA1P20036 260 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 LPOP22079 712 aaPredicted RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 CCR1P32246 355 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 PRKCIP41743 596 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 KLK7P49862 253 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ERFP50548 548 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 RABGGTBP53611 331 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ITGA8P53708 1063 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 PEX3P56589 373 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 CYLC2Q14093 348 aaPredicted RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 DMC1Q14565 340 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 SLC10A6Q3KNW5 377 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 SGO2Q562F6 1265 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 FAM209BQ5JX69 171 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ZPBP2Q6X784 338 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 GRK7Q8WTQ7 553 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 LPIN3Q9BQK8 851 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 FDXACB1Q9BRP7 624 aaPredicted RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 KIFC3Q9BVG8 833 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 PLSCR4Q9NRQ2 329 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 COL20A1Q9P218 1284 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 PSME2Q9UL46 239 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TNFSF13BQ9Y275 285 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 WDR81Q562E7 1941 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 A0A1B0GTH6 734 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TMEM221A6NGB7 291 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 MEI4A8MW99 385 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 M0QYT0 321 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 M0R296 226 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 BUB1O43683 1085 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 CNMDO75829 334 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ABCB1P08183 1280 aaPredicted RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 PTBP1P26599 531 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMG1-217ENST00000569764 HNRNPH1P31943 449 aaKnown RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 ETV5P41161 510 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 RFTN1Q14699 578 aaPredicted RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 BROXQ5VW32 411 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 FCRLBQ6BAA4 426 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 OVOS1Q6IE37 1185 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 FBXL19Q6PCT2 694 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 RRAGAQ7L523 313 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TSTD1Q8NFU3 115 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 OR6B3Q8NGW1 331 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ETNPPLQ8TBG4 499 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TSPEARQ8WU66 669 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 IRGQQ8WZA9 623 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 LRCH3Q96II8 777 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 DYDC2Q96IM9 177 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ERP44Q9BS26 406 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 NDST4Q9H3R1 872 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 XKR8Q9H6D3 395 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TRPC7Q9HCX4 862 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 EIF2B3Q9NR50 452 aaKnown RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 POLR3BQ9NW08 1133 aaPredicted RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 ADAM28Q9UKQ2 775 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TRIOBPQ9H2D6 2365 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 LINC01553A4QN01 128 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 EML1O00423 815 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 EIF1AYO14602 144 aaKnown RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 ZNF862O60290 1169 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 MED24O75448 989 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 TOM1L1O75674 476 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 IGHA2P01877 340 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SOD2P04179 222 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SLC2A3P11169 496 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 KRT5P13647 590 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 PFKLP17858 780 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CHRM3P20309 590 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 PIK3CBP42338 1070 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 CLCN5P51795 746 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 FAM209AQ5JX71 171 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 TAPT1Q6NXT6 567 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 MPZL3Q6UWV2 235 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 LRIG3Q6UXM1 1119 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 C15orf39Q6ZRI6 1047 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 DYMQ7RTS9 669 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 AKAP14Q86UN6 197 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ADSSL1Q8N142 457 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ST7LQ8TDW4 575 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 ASZ1Q8WWH4 475 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 FAM149B1Q96BN6 582 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 FRMD8P1Q9BZ68 369 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 PCDH18Q9HCL0 1135 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 MRPL47Q9HD33 250 aaKnown RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 KCNMB3Q9NPA1 279 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 BATF3Q9NR55 127 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 RGS18Q9NS28 235 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 PLA2G4CQ9UP65 541 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 RIPK3Q9Y572 518 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 SSC5DA1L4H1 1573 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 LCTP09848 1927 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 E9PMD0 336 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 H3BQ06 376 aaPredicted RBP6.76□□□□□ -1.33
SMG1-217ENST00000569764 NPC1O15118 1278 aa6.76□□□□□ -1.33
SMG1-217ENST00000569764 OGTO15294 1046 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms