RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 TBC1D3HP0C7X1 549 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 C1QTNF9P0C862 333 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 GZMAP12544 262 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ITGB7P26010 798 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 CD38P28907 300 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 EPHA8P29322 1005 aaPredicted RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 EPHB2P29323 1055 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 MAT2AP31153 395 aaKnown RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 GKP32189 559 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 NUDT1P36639 197 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ETFBP38117 255 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ABL2P42684 1182 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 AIF1P55008 147 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 FANCCQ00597 558 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 IL9RQ01113 521 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 SLC20A2Q08357 652 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 FGL2Q14314 439 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ASIC2Q16515 512 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 CA9Q16790 459 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ZNF284Q2VY69 593 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ARSIQ5FYB1 569 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 EFHC2Q5JST6 749 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 SFMBT2Q5VUG0 894 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3GQ6DHY5 549 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3CQ6IPX1 549 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 LRSAM1Q6UWE0 723 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 UNQ6494/PRO21346Q6UXR6 183 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ERN2Q76MJ5 926 aaKnown RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 PARS2Q7L3T8 475 aaKnown RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 TMC6Q7Z403 805 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ADAT2Q7Z6V5 191 aaKnown RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 SLCO6A1Q86UG4 719 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 PLPP6Q8IY26 295 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TBC1D3Q8IZP1 549 aaPredicted RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 FNIP1Q8TF40 1166 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ADAMTS14Q8WXS8 1223 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 CCDC114Q96M63 670 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ELF4Q99607 663 aaPredicted RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 EDEM3Q9BZQ6 932 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 TM6SF2Q9BZW4 377 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 MAGEH1Q9H213 219 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 LRRC19Q9H756 370 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 PDFQ9HBH1 243 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 AASDHPPTQ9NRN7 309 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 GPR27Q9NS67 375 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 ZFR2Q9UPR6 939 aaKnown RBP7.97□□□□□ -1.13
CDH3-209ENST00000569080 DMTF1Q9Y222 760 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 CA5BQ9Y2D0 317 aa7.97□□□□□ -1.13
CDH3-209ENST00000569080 A0A1W2PQJ5 194 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 A0A1W2PQU0 124 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 TMEM191CA6NGB0 347 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 TMCO5BA8MYB1 307 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 TLR4O00206 839 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 KDELR3O43731 214 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 DFNA5O60443 496 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 RNGTTO60942 597 aaKnown RBP7.96□□□□□ -1.14
CDH3-209ENST00000569080 LRCH4O75427 683 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 TMCC1O94876 653 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 TRIM16O95361 564 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 GSRP00390 522 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 CAPNS1P04632 268 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 GYPCP04921 128 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 PROS1P07225 676 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 ATXN1LP0C7T5 689 aaKnown RBP7.96□□□□□ -1.14
CDH3-209ENST00000569080 ADRB3P13945 408 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 PRLRP16471 622 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 TNFAIP3P21580 790 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 PSMA2P25787 234 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 HTR7P34969 479 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 GRK6P43250 576 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 RXRGP48443 463 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 NEK3P51956 506 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 C21orf59P57076 290 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 ST3GAL2Q16842 350 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 FILIP1LQ4L180 1135 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 SETMARQ53H47 684 aaPredicted RBP7.96□□□□□ -1.14
CDH3-209ENST00000569080 CARD16Q5EG05 197 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 PRAMEF14Q5SWL7 426 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 AFMIDQ63HM1 303 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 SEL1L3Q68CR1 1132 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 PPP1R2P3Q6NXS1 205 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 NEK5Q6P3R8 708 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 DCUN1D2Q6PH85 259 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 LEKR1Q6ZMV7 388 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 GCNT7Q6ZNI0 430 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 IQCHQ86VS3 1027 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 HORMAD1Q86X24 394 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 UMODL1-AS1Q8N2C9 162 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 CHCHD4Q8N4Q1 142 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 NPWQ8N729 165 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 PNPLA1Q8N8W4 532 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 MFSD2AQ8NA29 543 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 OR2AP1Q8NGE2 309 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 OR6K2Q8NGY2 324 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 SAP25Q8TEE9 199 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 SETD7Q8WTS6 366 aaKnown RBP7.96□□□□□ -1.14
CDH3-209ENST00000569080 HMCESQ96FZ2 354 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 EPAS1Q99814 870 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 HEPHQ9BQS7 1158 aa7.96□□□□□ -1.14
CDH3-209ENST00000569080 SNRNP25Q9BV90 132 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms