RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NPY2RP49146 381 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 OXCT1P55809 520 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 WNT3AP56704 352 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 CDH18Q13634 790 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 RASA2Q15283 850 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 HSP90AA5PQ58FG0 334 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 HHATQ5VTY9 493 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 RNF219Q5W0B1 726 aaPredicted RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 FAM109BQ6ICB4 259 aaPredicted RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 LILRA6Q6PI73 481 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 GPR65Q8IYL9 337 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 PHOSPHO2Q8TCD6 241 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 DDI1Q8WTU0 396 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 TTC17Q96AE7 1141 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 CHMP6Q96FZ7 201 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 SERAC1Q96JX3 654 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 SEMA3CQ99985 751 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 IQCGQ9H095 443 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 SLC25A51Q9H1U9 297 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 MAGEH1Q9H213 219 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 MAN1C1Q9NR34 630 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 C20orf96Q9NUD7 363 aaPredicted RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 CFAP97Q9P2B7 532 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 MAFFQ9ULX9 164 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 SMG5Q9UPR3 1016 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 MYOFQ9NZM1 2061 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 TRAV19A0A0A6YYK7 116 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 AP3B1O00203 1094 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 PRAMEF11O60813 436 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 ARHGEF15O94989 841 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 C1QAP02745 245 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 CA3P07451 260 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 NMBRP28336 390 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 CDC25CP30307 473 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 PDE1BQ01064 536 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 NIPAL4Q0D2K0 466 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 MPP3Q13368 585 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 ZKSCAN8Q15776 578 aaPredicted RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 ANKRD20A4Q4UJ75 823 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 SPANXN3Q5MJ09 141 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 C9orf50Q5SZB4 431 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 TMCO4Q5TGY1 634 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 LINGO4Q6UY18 593 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 BBS5Q8N3I7 341 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 PGBD5Q8N414 524 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 TCP10LQ8TDR4 215 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 ZNF473Q8WTR7 871 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 CENPTQ96BT3 561 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 ZFRQ96KR1 1074 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 MRGPRX2Q96LB1 330 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 HTATIP2Q9BUP3 242 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 CINPQ9BW66 212 aaPredicted RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 POLR1EQ9GZS1 481 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 PSAT1Q9Y617 370 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 MAGEB16A2A368 324 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 TCP11X1B4DZS4 312 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 NRG2O14511 850 aaPredicted RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 CACNG3O60359 315 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 USP1O94782 785 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 FAM107AO95990 144 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 NEFHP12036 1026 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 EPCAMP16422 314 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 AVPR1AP37288 418 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 ABCG1P45844 678 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 SCNN1BP51168 640 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 CLCN4P51793 760 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 IL9RQ01113 521 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 MGAT5Q09328 741 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 FSCBQ5H9T9 825 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 GPR158Q5T848 1215 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 STEAP4Q687X5 459 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 LVRNQ6Q4G3 990 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 TMC8Q8IU68 726 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 PPHLN1Q8NEY8 458 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 SP7Q8TDD2 431 aaPredicted RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 MZB1Q8WU39 189 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 AZIN2Q96A70 460 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 IFT43Q96FT9 208 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 IMP4Q96G21 291 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 SGSM3Q96HU1 749 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 PPP1R2P1Q96PQ5 205 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 TGS1Q96RS0 853 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 AGAP2Q99490 1192 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 IARS2Q9NSE4 1012 aaKnown RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 UBA2Q9UBT2 640 aaPredicted RBP7.17□□□□□ -1.26
SMG1-215ENST00000568239 VPS28Q9UK41 221 aa7.17□□□□□ -1.26
SMG1-215ENST00000568239 FAM237BA0A1B0GVD1 139 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 H3BNC9 293 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 COPEO14579 308 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 SNAP91O60641 907 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 ALDH1A2O94788 518 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 VAPBO95292 243 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 CCR2P41597 374 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 WDR4P57081 412 aaKnown RBP7.16□□□□□ -1.26
SMG1-215ENST00000568239 CBLBQ13191 982 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 SLC1A5Q15758 541 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 QPCTQ16769 361 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 PCID2Q5JVF3 399 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 TMEM135Q86UB9 458 aa7.16□□□□□ -1.26
SMG1-215ENST00000568239 KCNMB4Q86W47 210 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms