RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 PTPRN2Q92932 1015 aa15.97■□□□□ 0.15
SPG7-218ENST00000568205 ZNF419Q96HQ0 510 aaPredicted RBP15.97■□□□□ 0.15
SPG7-218ENST00000568205 IL12RB2Q99665 862 aa15.97■□□□□ 0.15
SPG7-218ENST00000568205 FERMT1Q9BQL6 677 aa15.97■□□□□ 0.15
SPG7-218ENST00000568205 TM6SF2Q9BZW4 377 aa15.97■□□□□ 0.15
SPG7-218ENST00000568205 TNKS2Q9H2K2 1166 aa15.97■□□□□ 0.15
SPG7-218ENST00000568205 RBM22Q9NW64 420 aaKnown RBP eCLIP15.97■□□□□ 0.151e-9■■■■□ 21.2
SPG7-218ENST00000568205 CDC23Q9UJX2 597 aa15.97■□□□□ 0.15
SPG7-218ENST00000568205 ZDBF2Q9HCK1 2354 aa15.97■□□□□ 0.15
SPG7-218ENST00000568205 MUC22E2RYF6 1773 aaPredicted RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 A0A1W2PQF6 199 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 TARSL2A2RTX5 802 aaKnown RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 CFAP69A5D8W1 941 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 RNF103O00237 685 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 MUSKO15146 869 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 KCNN4O15554 427 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 BNIP3LO60238 219 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 SYNCRIPO60506 623 aaKnown RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 SIN3BO75182 1162 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 NEBLO76041 1014 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 COL9A1P20849 921 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 PTPN3P26045 913 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 RECQLP46063 649 aaPredicted RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 WASHC5Q12768 1159 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 MTAPQ13126 283 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 CAMK2GQ13555 558 aaPredicted RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 CYP1B1Q16678 543 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 CARD16Q5EG05 197 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 ATXN7L2Q5T6C5 722 aaPredicted RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 C9orf64Q5T6V5 341 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 PLPP6Q8IY26 295 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 C12orf50Q8NA57 414 aaPredicted RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 TSEN2Q8NCE0 465 aaKnown RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 OR2AP1Q8NGE2 309 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 OR2A12Q8NGT7 310 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 EXOC2Q96KP1 924 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 CCDC114Q96M63 670 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 GDAP1L1Q96MZ0 367 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 CEP41Q9BYV8 373 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 USP29Q9HBJ7 922 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 NT5MQ9NPB1 228 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 PRSS16Q9NQE7 514 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 POLR3BQ9NW08 1133 aaPredicted RBP15.96■□□□□ 0.15
SPG7-218ENST00000568205 C2orf42Q9NWW7 574 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 AMACRQ9UHK6 382 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 ZNF148Q9UQR1 794 aa15.96■□□□□ 0.15
SPG7-218ENST00000568205 NYNRINQ9P2P1 1898 aaKnown RBP15.95■□□□□ 0.14
SPG7-218ENST00000568205 PHF2O75151 1096 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 STK10O94804 968 aaKnown RBP15.95■□□□□ 0.14
SPG7-218ENST00000568205 IGSF6O95976 241 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 HLA-DQB2P05538 268 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 RGRP47804 291 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 SNRPD1P62314 119 aaKnown RBP15.95■□□□□ 0.14
SPG7-218ENST00000568205 CRY1Q16526 586 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 TEX44Q53QW1 395 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 KIAA1211LQ6NV74 962 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 TMEM92Q6UXU6 159 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 DPY19L3Q6ZPD9 716 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 PGBD5Q8N414 524 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 CNTD1Q8N815 330 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 FAM71DQ8N9W8 422 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 MAGOHBQ96A72 148 aaKnown RBP15.95■□□□□ 0.14
SPG7-218ENST00000568205 VAT1Q99536 393 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 MGME1Q9BQP7 344 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 TMEM121Q9BTD3 319 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 CD248Q9HCU0 757 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 HAUS2Q9NVX0 235 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 DRG1Q9Y295 367 aaKnown RBP15.95■□□□□ 0.14
SPG7-218ENST00000568205 NUP205Q92621 2012 aa15.95■□□□□ 0.14
SPG7-218ENST00000568205 FAM86C2PA6NEL3 165 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 ITGAVP06756 1048 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 CSNK1DP48730 415 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 CCNHP51946 323 aaPredicted RBP15.94■□□□□ 0.14
SPG7-218ENST00000568205 DGKEP52429 567 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 MAXP61244 160 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 NSUN2Q08J23 767 aaKnown RBP eCLIP15.94■□□□□ 0.14
SPG7-218ENST00000568205 TUBB2AQ13885 445 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 ELAVL3Q14576 367 aaKnown RBP15.94■□□□□ 0.14
SPG7-218ENST00000568205 WHAMMP3Q1A5X7 153 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 FAM182AQ5T1J6 154 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 MAMSTRQ6ZN01 415 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 ZNF567Q8N184 647 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 STK40Q8N2I9 435 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 RYBPQ8N488 228 aaPredicted RBP15.94■□□□□ 0.14
SPG7-218ENST00000568205 TMEM105Q8N8V8 129 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 CHST14Q8NCH0 376 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 OR8D1Q8WZ84 308 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 RTP4Q96DX8 246 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 ERLEC1Q96DZ1 483 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 TEKT5Q96M29 485 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 AGAP3Q96P47 875 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 TUBB2BQ9BVA1 445 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 POLR1EQ9GZS1 481 aaKnown RBP15.94■□□□□ 0.14
SPG7-218ENST00000568205 FBRSQ9HAH7 460 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 C11orf16Q9NQ32 467 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 KLHL8Q9P2G9 620 aaPredicted RBP15.94■□□□□ 0.14
SPG7-218ENST00000568205 HECAQ9UBI9 543 aaPredicted RBP15.94■□□□□ 0.14
SPG7-218ENST00000568205 ATP8A1Q9Y2Q0 1164 aa15.94■□□□□ 0.14
SPG7-218ENST00000568205 FARP1Q9Y4F1 1045 aaPredicted RBP15.94■□□□□ 0.14
SPG7-218ENST00000568205 TTLL3Q9Y4R7 772 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms