RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 HS3ST3B1Q9Y662 390 aa9.06□□□□□ -0.96
NIFKP4-201ENST00000567275 EFCAB8A8MWE9 144 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 ACTL6BO94805 426 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 CYP3A4P08684 503 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 PPP2R1AP30153 589 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 EPHX2P34913 555 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 ME1P48163 572 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 CTCFP49711 727 aaPredicted RBP9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 SHC2P98077 582 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 MTX1Q13505 466 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 TRIM60Q495X7 471 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 MCM10Q7L590 875 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 CCDC117Q8IWD4 279 aaPredicted RBP9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 ARFGAP1Q8N6T3 406 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 OR1N1Q8NGS0 311 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 HTATIP2Q9BUP3 242 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 TMEM120AQ9BXJ8 343 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 UBA5Q9GZZ9 404 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 PNNQ9H307 717 aaKnown RBP9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 LIN7CQ9NUP9 197 aaKnown RBP9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 RNF123Q5XPI4 1314 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
NIFKP4-201ENST00000567275 ADAMTSL1Q8N6G6 1762 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 DPPA5A6NC42 116 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 FAM90A18PA6NE21 464 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 FAM90A16PA6NEW6 464 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 FAM90A9PA6NNJ1 464 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 SLC38A8A6NNN8 435 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 FAM90A5PA8MXJ8 464 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 ALDOCP09972 364 aaKnown RBP9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 FAM90A15PP0C7V4 464 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 FAM90A14PP0C7W9 464 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 FOXL2P58012 376 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 FAM3BP58499 235 aaPredicted RBP9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 B4GALNT1Q00973 533 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 MAP2K1Q02750 393 aaPredicted RBP9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 BLMHQ13867 455 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 ADGRF3Q8IZF5 1079 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 ANKRD42Q8N9B4 389 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 MYRIPQ8NFW9 859 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 ZNF347Q96SE7 839 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 POT1Q9NUX5 634 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
NIFKP4-201ENST00000567275 ACKR2O00590 384 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 PRPF4O43172 522 aaKnown RBP eCLIP9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 SH3BP5O60239 455 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 CSTBP04080 98 aaKnown RBP9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 IGFBP2P18065 325 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 AP2B1P63010 937 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 RPS6KA2Q15349 733 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 TMEM95Q3KNT9 176 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 CCDC38Q502W7 563 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 PARP10Q53GL7 1025 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 LRCH2Q5VUJ6 765 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 NFRKBQ6P4R8 1299 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 TMED8Q6PL24 325 aaPredicted RBP9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 RAB11FIP2Q7L804 512 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 PIP4P1Q86T03 277 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 SLC44A2Q8IWA5 706 aaPredicted RBP9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 CNTROBQ8N137 903 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 OR52N4Q8NGI2 321 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 HERPUD2Q9BSE4 406 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 OSBPL5Q9H0X9 879 aaPredicted RBP9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 BABAM1Q9NWV8 329 aa9.03□□□□□ -0.96
NIFKP4-201ENST00000567275 LAMB4A4D0S4 1761 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 LY6G6EA0A0G2JKS1 128 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 HALP42357 657 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 PIP4K2AP48426 406 aaPredicted RBP9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 CCT4P50991 539 aaKnown RBP9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 SRSF1Q07955 248 aaKnown RBP eCLIP9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 PGM5Q15124 567 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 HLFQ16534 295 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 DEFB115Q30KQ5 88 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 LRIG3Q6UXM1 1119 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 USP50Q70EL3 339 aaPredicted RBP9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 PIMREGQ9BSJ6 248 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 TMX4Q9H1E5 349 aaPredicted RBP9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 ELAC1Q9H777 363 aaKnown RBP9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 CDHR2Q9BYE9 1310 aa9.02□□□□□ -0.97
NIFKP4-201ENST00000567275 ABCC12Q96J65 1359 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 CYP3A7-CYP3A51PA0A087WV96 503 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 NBNO60934 754 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 CYP3A7P24462 503 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 CIITAP33076 1130 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 TRIM14Q14142 442 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 DCTN1Q14203 1278 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 TBRG1Q3YBR2 411 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 MIDNQ504T8 468 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 SLC10A5Q5PT55 438 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 ZNF34Q8IZ26 560 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 SLC44A5Q8NCS7 719 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 ZNF548Q8NEK5 533 aaPredicted RBP9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 RBM17Q96I25 401 aaKnown RBP9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 PLEKHF1Q96S99 279 aa9.01□□□□□ -0.97
NIFKP4-201ENST00000567275 SORBS1Q9BX66 1292 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms