RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 KLHDC8BQ8IXV7 354 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 CPA6Q8N4T0 437 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 SPATA22Q8NHS9 363 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 LRRC40Q9H9A6 602 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 XAB2Q9HCS7 855 aaKnown RBP19.05■□□□□ 0.64
COMMD4-213ENST00000565834 SAYSD1Q9NPB0 183 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 HPS4Q9NQG7 708 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 ZNF446Q9NWS9 450 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 UBP1Q9NZI7 540 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 FBXO10Q9UK96 956 aa19.05■□□□□ 0.64
COMMD4-213ENST00000565834 EIF3HO15372 352 aaKnown RBP eCLIP19.04■□□□□ 0.64
COMMD4-213ENST00000565834 TMCC1O94876 653 aa19.04■□□□□ 0.64
COMMD4-213ENST00000565834 CD160O95971 181 aa19.04■□□□□ 0.64
COMMD4-213ENST00000565834 DSC2Q02487 901 aa19.04■□□□□ 0.64
COMMD4-213ENST00000565834 PDIA2Q13087 525 aaKnown RBP19.04■□□□□ 0.64
COMMD4-213ENST00000565834 NR1H3Q13133 447 aa19.04■□□□□ 0.64
COMMD4-213ENST00000565834 CYTH1Q15438 398 aa19.04■□□□□ 0.64
COMMD4-213ENST00000565834 FNBP1LQ5T0N5 605 aa19.04■□□□□ 0.64
COMMD4-213ENST00000565834 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.04■□□□□ 0.64
COMMD4-213ENST00000565834 TSEN2Q8NCE0 465 aaKnown RBP19.04■□□□□ 0.64
COMMD4-213ENST00000565834 IMP4Q96G21 291 aaKnown RBP19.04■□□□□ 0.64
COMMD4-213ENST00000565834 MGME1Q9BQP7 344 aa19.04■□□□□ 0.64
COMMD4-213ENST00000565834 CXorf51AA0A1B0GTR3 108 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 MUSKO15146 869 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 MBTPS2O43462 519 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 SUN1O94901 812 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 MT-CYBP00156 380 aaPredicted RBP19.03■□□□□ 0.64
COMMD4-213ENST00000565834 GDI1P31150 447 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 DGKGP49619 791 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 SERPINH1P50454 418 aaKnown RBP19.03■□□□□ 0.64
COMMD4-213ENST00000565834 NIPAL4Q0D2K0 466 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 MPP3Q13368 585 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 RUNX3Q13761 415 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 SPARCL1Q14515 664 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 BBS9Q3SYG4 887 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 ZNF534Q76KX8 674 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 KIAA0907Q7Z7F0 614 aaPredicted RBP19.03■□□□□ 0.64
COMMD4-213ENST00000565834 METTL3Q86U44 580 aaKnown RBP19.03■□□□□ 0.64
COMMD4-213ENST00000565834 CAND1Q86VP6 1230 aaKnown RBP19.03■□□□□ 0.64
COMMD4-213ENST00000565834 RELL1Q8IUW5 271 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 AHI1Q8N157 1196 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 UBLCP1Q8WVY7 318 aaPredicted RBP19.03■□□□□ 0.64
COMMD4-213ENST00000565834 PPM1EQ8WY54 764 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 GUCD1Q96NT3 240 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 SEMA3CQ99985 751 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 TRMT61BQ9BVS5 477 aaKnown RBP19.03■□□□□ 0.64
COMMD4-213ENST00000565834 FUT8Q9BYC5 575 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 NUMBLQ9Y6R0 609 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 COL4A3Q01955 1670 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 KIAA1549LQ6ZVL6 1849 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 XIRP2A4UGR9 3374 aa19.03■□□□□ 0.64
COMMD4-213ENST00000565834 OTOL1A6NHN0 477 aaPredicted RBP19.02■□□□□ 0.64
COMMD4-213ENST00000565834 E7ESA3 106 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 MLNP12872 115 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 CD86P42081 329 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 GRIA1P42261 906 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 MAGEA4P43358 317 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 SULT2A1Q06520 285 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 SLC20A2Q08357 652 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 MTM1Q13496 603 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 HTR4Q13639 388 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 MSS51Q4VC12 460 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 DNAJC21Q5F1R6 531 aaKnown RBP19.02■□□□□ 0.64
COMMD4-213ENST00000565834 ALG1LQ6GMV1 187 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 NAPEPLDQ6IQ20 393 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 TRMT10CQ7L0Y3 403 aaKnown RBP19.02■□□□□ 0.64
COMMD4-213ENST00000565834 C12orf40Q86WS4 652 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 ETFBKMTQ8IXQ9 262 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 DEFB123Q8N688 67 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 IPMKQ8NFU5 416 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 ARRDC2Q8TBH0 407 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 RPP25Q9BUL9 199 aaKnown RBP19.02■□□□□ 0.64
COMMD4-213ENST00000565834 CDC42EP4Q9H3Q1 356 aaKnown RBP19.02■□□□□ 0.64
COMMD4-213ENST00000565834 VPS45Q9NRW7 570 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 SLC25A13Q9UJS0 675 aa19.02■□□□□ 0.64
COMMD4-213ENST00000565834 ANHXE9PGG2 379 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 TRIM24O15164 1050 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 AVILO75366 819 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 TULP3O75386 442 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 PMPCBO75439 489 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 BANF1O75531 89 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 MT-CO1P00395 513 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 CISD3P0C7P0 127 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 HSD17B3P37058 310 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 GAB4Q2WGN9 574 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 SPDYCQ5MJ68 293 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 MBLAC2Q68D91 279 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 LRRC8BQ6P9F7 803 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 LINC00523Q86TU6 105 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 PRPF39Q86UA1 669 aaKnown RBP19.01■□□□□ 0.63
COMMD4-213ENST00000565834 ADIPOR2Q86V24 386 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 ZBED8Q8IZ13 594 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 WFIKKN2Q8TEU8 576 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 FSD1LQ9BXM9 530 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 PABPC3Q9H361 631 aaKnown RBP19.01■□□□□ 0.63
COMMD4-213ENST00000565834 SEMA4AQ9H3S1 761 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 SLC27A6Q9Y2P4 619 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 FCF1Q9Y324 198 aaKnown RBP19.01■□□□□ 0.63
COMMD4-213ENST00000565834 ANKRD36A6QL64 1941 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 TTC24A2A3L6 582 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms