RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 CCNHP51946 323 aaPredicted RBP20.26■□□□□ 0.83
CLN6-206ENST00000565471 NEK3P51956 506 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 ZNF143P52747 638 aaPredicted RBP20.26■□□□□ 0.83
CLN6-206ENST00000565471 ZNF284Q2VY69 593 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 DNAJC24Q6P3W2 148 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 SLFN11Q7Z7L1 901 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 BPIFA3Q9BQP9 254 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 DNAI1Q9UI46 699 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 HPCAL4Q9UM19 191 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 FCF1Q9Y324 198 aaKnown RBP20.26■□□□□ 0.83
CLN6-206ENST00000565471 PCDHGA1Q9Y5H4 931 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 DOCK9Q9BZ29 2069 aa20.26■□□□□ 0.83
CLN6-206ENST00000565471 ANKRD62A6NC57 917 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 RAMP2O60895 175 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 DNA2P51530 1060 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 AIF1P55008 147 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 SFMBT2Q5VUG0 894 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 PPP1R2P3Q6NXS1 205 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 KANSL1Q7Z3B3 1105 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 KLHDC7BQ96G42 594 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 LRIG1Q96JA1 1093 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 MAGEB5Q9BZ81 275 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 TMEM63CQ9P1W3 806 aa20.25■□□□□ 0.83
CLN6-206ENST00000565471 ENC1O14682 589 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 SLC31A1O15431 190 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 CCP110O43303 1012 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 PCDH8O95206 1070 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 LDOC1O95751 146 aaPredicted RBP20.24■□□□□ 0.83
CLN6-206ENST00000565471 CDK4P11802 303 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 ADRB3P13945 408 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 PRLRP16471 622 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 HNRNPA2B1P22626 353 aaKnown RBP20.24■□□□□ 0.83
CLN6-206ENST00000565471 AKT2P31751 481 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 SMAD1Q15797 465 aaKnown RBP20.24■□□□□ 0.83
CLN6-206ENST00000565471 ANO6Q4KMQ2 910 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 TMEM259Q4ZIN3 620 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 EFHC2Q5JST6 749 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 PPP1R15BQ5SWA1 713 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 ACAD10Q6JQN1 1059 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 ZSCAN30Q86W11 494 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 PROSER1Q86XN7 944 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 MCOLN2Q8IZK6 566 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 CNDP2Q96KP4 475 aaKnown RBP20.24■□□□□ 0.83
CLN6-206ENST00000565471 MCEEQ96PE7 176 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 SYT11Q9BT88 431 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 ZFR2Q9UPR6 939 aaKnown RBP20.24■□□□□ 0.83
CLN6-206ENST00000565471 CA5BQ9Y2D0 317 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 ACTL7AQ9Y615 435 aa20.24■□□□□ 0.83
CLN6-206ENST00000565471 ZSCAN5CA6NGD5 496 aaPredicted RBP20.23■□□□□ 0.83
CLN6-206ENST00000565471 AP1G1O43747 822 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 GSRP00390 522 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 C1SP09871 688 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 RPL7AP62424 266 aaKnown RBP20.23■□□□□ 0.83
CLN6-206ENST00000565471 BNIP3Q12983 259 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 POLD3Q15054 466 aaPredicted RBP20.23■□□□□ 0.83
CLN6-206ENST00000565471 KIAA1161Q6NSJ0 714 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 FBXL19Q6PCT2 694 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 IRF2BP2Q7Z5L9 587 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 EID2Q8N6I1 236 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 RTL3Q8N8U3 475 aaKnown RBP20.23■□□□□ 0.83
CLN6-206ENST00000565471 FAM174AQ8TBP5 190 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 BAP1Q92560 729 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 VCPIP1Q96JH7 1222 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 CNPY3Q9BT09 278 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 TM6SF2Q9BZW4 377 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 RTN4Q9NQC3 1192 aaKnown RBP20.23■□□□□ 0.83
CLN6-206ENST00000565471 FADS3Q9Y5Q0 445 aa20.23■□□□□ 0.83
CLN6-206ENST00000565471 SMTNL1A8MU46 457 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 TEX33O43247 280 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 KDELR3O43731 214 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 THEGLP0DJG4 465 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 DESP17661 470 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 EPHB2P29323 1055 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 SNRPD1P62314 119 aaKnown RBP20.22■□□□□ 0.83
CLN6-206ENST00000565471 RPS21P63220 83 aaKnown RBP20.22■□□□□ 0.83
CLN6-206ENST00000565471 SEL1L3Q68CR1 1132 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 DCUN1D2Q6PH85 259 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 PARS2Q7L3T8 475 aaKnown RBP20.22■□□□□ 0.83
CLN6-206ENST00000565471 ABI3BPQ7Z7G0 1075 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 PYROXD2Q8N2H3 581 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 OR2AP1Q8NGE2 309 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 CASKIN2Q8WXE0 1202 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 KLK6Q92876 244 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 FEM1CQ96JP0 617 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 EPAS1Q99814 870 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 MYOCQ99972 504 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 CCDC86Q9H6F5 360 aaKnown RBP20.22■□□□□ 0.83
CLN6-206ENST00000565471 ZDHHC6Q9H6R6 413 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 FZD10Q9ULW2 581 aa20.22■□□□□ 0.83
CLN6-206ENST00000565471 WASH4PA8MWX3 477 aa20.21■□□□□ 0.83
CLN6-206ENST00000565471 TAF4O00268 1085 aa20.21■□□□□ 0.83
CLN6-206ENST00000565471 ACADVLP49748 655 aa20.21■□□□□ 0.83
CLN6-206ENST00000565471 YBEYP58557 167 aaPredicted RBP20.21■□□□□ 0.83
CLN6-206ENST00000565471 CCDC157Q569K6 752 aa20.21■□□□□ 0.83
CLN6-206ENST00000565471 SCYL2Q6P3W7 929 aa20.21■□□□□ 0.83
CLN6-206ENST00000565471 DHRS13Q6UX07 377 aa20.21■□□□□ 0.83
CLN6-206ENST00000565471 TMPRSS12Q86WS5 348 aa20.21■□□□□ 0.83
CLN6-206ENST00000565471 RYBPQ8N488 228 aaPredicted RBP20.21■□□□□ 0.83
CLN6-206ENST00000565471 TSC1Q92574 1164 aa20.21■□□□□ 0.83
CLN6-206ENST00000565471 RAB7BQ96AH8 199 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms