RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 IZUMO3Q5VZ72 239 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ITPRIPL1Q6GPH6 555 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 WDR93Q6P2C0 686 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ZC3H14Q6PJT7 736 aaKnown RBP11.29□□□□□ -0.6
SF3B3-205ENST00000564899 C4orf22Q6V702 233 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ZNF567Q8N184 647 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 TAB3Q8N5C8 712 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-205ENST00000564899 IFT81Q8WYA0 676 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 SEC14L1Q92503 715 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 MAML1Q92585 1016 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 SNF8Q96H20 258 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ZNF599Q96NL3 588 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
SF3B3-205ENST00000564899 IL12RB2Q99665 862 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 FEM1AQ9BSK4 669 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 TRMT61BQ9BVS5 477 aaKnown RBP11.29□□□□□ -0.6
SF3B3-205ENST00000564899 SLC2A11Q9BYW1 496 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 PDFQ9HBH1 243 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 HPS4Q9NQG7 708 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 SLC2A4RGQ9NR83 387 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 RAB6BQ9NRW1 208 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 ABCB8Q9NUT2 735 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 UBA2Q9UBT2 640 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-205ENST00000564899 TRHDEQ9UKU6 1024 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 OR51B4Q9Y5P0 310 aa11.29□□□□□ -0.6
SF3B3-205ENST00000564899 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 DNALI1O14645 258 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 NDC80O14777 642 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 CACNG3O60359 315 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 SNAP91O60641 907 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 PEX11BO96011 259 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 PABPC1P11940 636 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 GLDCP23378 1020 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 IVDP26440 423 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 TNFRSF8P28908 595 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 HLA-FP30511 346 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 RENBPP51606 427 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 STARD6P59095 220 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 BASP1P80723 227 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 CSTF1Q05048 431 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 TNK2Q07912 1038 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 NR1H3Q13133 447 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 CALCOCO2Q13137 446 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 RUNX3Q13761 415 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 HNRNPDQ14103 355 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 HLTFQ14527 1009 aaKnown RBP eCLIP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 LBRQ14739 615 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 TRADDQ15628 312 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 PITRM1Q5JRX3 1037 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 MARC1Q5VT66 337 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 LEKR1Q6ZMV7 388 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 PID1Q7Z2X4 250 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 GSPT2Q8IYD1 628 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 APCDD1Q8J025 514 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 NAT16Q8N8M0 369 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 BBOF1Q8ND07 529 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 ALG14Q96F25 216 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 LMLNQ96KR4 655 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 TEKT5Q96M29 485 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 AGAP3Q96P47 875 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 C2orf49Q9BVC5 232 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 GBA3Q9H227 469 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 DNAJC17Q9NVM6 304 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 RBM22Q9NW64 420 aaKnown RBP eCLIP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 SPATA6Q9NWH7 488 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 GRHL1Q9NZI5 618 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 WHRNQ9P202 907 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 NCDNQ9UBB6 729 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 RSPH14Q9UHP6 348 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 VPS51Q9UID3 782 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 GGA2Q9UJY4 613 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 RAB21Q9UL25 225 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 SMG5Q9UPR3 1016 aaKnown RBP11.28□□□□□ -0.6
SF3B3-205ENST00000564899 TTLL3Q9Y4R7 772 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 DOCK4Q8N1I0 1966 aa11.28□□□□□ -0.6
SF3B3-205ENST00000564899 F5H423 210 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ZMPSTE24O75844 475 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 METTL18O95568 372 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 HLA-DQB2P05538 268 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ITIH2P19823 946 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 NFKB1P19838 968 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 PSMB4P28070 264 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 FDFT1P37268 417 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 MMP13P45452 471 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 DGKGP49619 791 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 PLK1P53350 603 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ITGA8P53708 1063 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 PLTPP55058 493 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ARF5P84085 180 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 SLC10A7Q0GE19 358 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ZNF235Q14590 738 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 LPAL2Q16609 132 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 ST3GAL2Q16842 350 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 PARP6Q2NL67 630 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 FUT11Q495W5 492 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 FAXCQ5TGI0 409 aa11.27□□□□□ -0.61
SF3B3-205ENST00000564899 RETSATQ6NUM9 610 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms